Evidence map›Paper›PMID 31692082›Full record

ArticleJournal of clinical laboratory analysis2020

Clinical relevance of the lnc-HNF1B-3:1 genetic polymorphisms in Western Chinese tuberculosis patients.

Qian Wu, Huiyu Zhong, Hao Bai, Tangyuheng Liu, Jiajia Song, Yang Wen, Xingbo Song, Binwu Ying

Abstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Long non-coding RNA transcripts inNon-coding RNA research · 2025
    Review
  3. Article
  4. Association Between Genetic Polymorphisms of lncRNAInfection and drug resistance · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Qian WuDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.ORCID https://orcid.org/0000-0002-7944-2287
Huiyu ZhongDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.
Hao BaiDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.
Tangyuheng LiuDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.
Jiajia SongDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.ORCID https://orcid.org/0000-0002-0248-6513
Yang WenDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.
Xingbo SongDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.
Binwu YingDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, P. R China.

Funding

National Natural Science Foundation of China 81472026National Natural Science Foundation of China 81672095National Natural Science Foundation of China 81672096
6 · The paper itself

Abstract

backgroundTuberculosis remains a global public health problem. Genetic polymorphisms may affect the susceptibility, clinical characteristics, and adverse drug reactions of patients with TB. The present study aimed to examine the association of single nucleotide polymorphisms of lncRNA-HNF1B-3:1 with the clinical manifestation of TB in a Western Chinese population.

methodA total of 526 tuberculosis patients and 561 healthy subjects were recruited in Western China. The correlation between lnc-HNF1B-3:1 polymorphism and tuberculosis susceptibility was investigated. Moreover, the influence on adverse drug reactions following treatment was explored. A total of 7 SNPs within the lnc-HNF1B-3:1 locus was genotyped by the improved multiplex ligation detection reaction method.

resultsNo significant associations were noted between TB susceptibility and the presence of all 7 SNPs of the lnc-HNF1B-3:1 as determined by single-locus analysis (All P > .05). The AA genotype of rs12939622 (in the dominant model) and the AA genotype of rs4262994 (in the recessive model) caused increased susceptibility of the subjects to fever (P < .001 and P = .008, respectively). The Rs2542670 G allele was associated with increased risk of thrombocytopenia, leukopenia, and chronic kidney damage following drug administration (P = .007, .029, .003, respectively).

conclusionThe present study reported for the first time that the rs12939622, rs4262994 and rs2542670 genotypes in lnc-HNF1B-3:1 locus may influence the clinical manifestations of tuberculosis.

Indexed as

Genetic Predisposition to DiseaseAdultAntitubercular AgentsAsian PeopleFemaleGenes, DominantGenes, RecessiveGenetic Association StudiesHumansMaleModels, GeneticPolymorphism, Single NucleotideRisk FactorsRNA, Long NoncodingTuberculosisAntitubercular AgentsRNA, Long Noncodingadverse drug reactionsanti-tuberculosis treatmentlnc-HNF1B-3:1single nucleotide polymorphismtuberculosis

Identifiers

PMID31692082
PMCPMC7083404

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.