Evidence map›Paper›PMID 31690676›Full record

ArticlemBio2019

Cause and Effectors: Whole-Genome Comparisons Reveal Shared but Rapidly Evolving Effector Sets among Host-Specific Plant-Castrating Fungi.

William C Beckerson, Ricardo C Rodríguez de la Vega, Fanny E Hartmann, Marine Duhamel, Tatiana Giraud, Michael H Perlin

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Review
  3. The First of Us:bioRxiv : the preprint server for biology · 2025
    Article
  4. Characterization ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Action Mechanisms of Effectors in Plant-Pathogen Interaction.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Effectors with Different Gears: Divergence ofJournal of fungi (Basel, Switzerland) · 2020
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

William C Beckerson *Department of Biology, Program on Disease Evolution, University of Louisville, Louisville, Kentucky, USA.
Ricardo C Rodríguez de la Vega *Ecologie Systématique et Evolution, Université Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-9852-6654
Fanny E HartmannEcologie Systématique et Evolution, Université Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.ORCID 0000-0002-9365-4008
Marine DuhamelEcologie Systématique et Evolution, Université Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.
Tatiana Giraud *Ecologie Systématique et Evolution, Université Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.
Michael H Perlin *Department of Biology, Program on Disease Evolution, University of Louisville, Louisville, Kentucky, USA michael.perlin@louisville.edu.ORCID 0000-0002-5580-188X
Université Paris-Sud · FRUniversity of Louisville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant pathogens utilize a portfolio of secreted effectors to successfully infect and manipulate their hosts. It is, however, still unclear whether changes in secretomes leading to host specialization involve mostly effector gene gains/losses or changes in their sequences. To test these hypotheses, we compared the secretomes of three host-specific castrating anther smut fungi (

Indexed as

Adaptation, PhysiologicalDNA Copy Number VariationsDNA Transposable ElementsFungiGenome, FungalGenome-Wide Association StudyGenomicsHost-Pathogen InteractionsPlant DiseasesPlantsSelection, GeneticSpecies SpecificityDNA Transposable Elementseffectorsfunctional proteomicsfungal pathogenshost specificitysmall secreted proteins

Identifiers

PMID31690676
PMCPMC6831777
OpenAlexW2985871441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.