Evidence map›Paper›PMID 31688885›Full record

ArticleJAMA2019

Association of Genetic Variants With Primary Open-Angle Glaucoma Among Individuals With African Ancestry.

Genetics of Glaucoma in People of African Descent (GGLAD) Consortium, Michael A Hauser, R Rand Allingham, Tin Aung, Carly J Van Der Heide, Kent D Taylor, Jerome I Rotter, Shih-Hsiu J Wang, Pieter W M Bonnemaijer, Susan E Williams and 84 more

Open access · bronzeAbstract readMulticenter StudyValidation Study
In one paragraph

Article in JAMA, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 2 pooled it
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 2 syntheses or guidelines pooled it, 73 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

94 authors at 20 institutions in 14 countries.

Genetics of Glaucoma in People of African Descent (GGLAD) Consortium
Michael A HauserDepartment of Medicine, Duke University, Durham, North Carolina.
R Rand AllinghamDepartment of Ophthalmology, Duke University, Durham, North Carolina.
Tin AungSingapore Eye Research Institute, Singapore.
Carly J Van Der HeideCarver College of Medicine, Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City.
Kent D TaylorThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California.
Jerome I RotterThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California.
Shih-Hsiu J WangDepartment of Pathology, Duke University, Durham, North Carolina.
Pieter W M BonnemaijerDepartment of Epidemiology, Erasmus MC, Rotterdam, the Netherlands.
Susan E WilliamsDivision of Ophthalmology, Department of Neurosciences, University of the Witwatersrand, Johannesburg, South Africa.
Sadiq M AbdullahiNational Eye Centre, Kaduna, Nigeria.
Khaled K Abu-AmeroDepartment of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia.
Michael G AndersonCarver College of Medicine, Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City.
Stephen AkafoUnit of Ophthalmology, Department of Surgery, University of Ghana Medical School, Accra, Ghana.
Mahmoud B AlhassanNational Eye Centre, Kaduna, Nigeria.
Ifeoma AsimaduDepartment of Ophthalmology, ESUT Teaching Hospital Parklane, Enugu, Nigeria.
Radha AyyagariShiley Eye Institute, Hamilton Glaucoma Center, Department of Ophthalmology, University of California, San Diego, La Jolla.
Saydou BakayokoInstitut d'Ophtalmologie Tropicale de l'Afrique, Bamako, Mali.
Prisca Biangoup NyamsiService Spécialisé d'ophtalmologie, Hôpital Militaire de Région No1 de Yaoundé, Yaoundé, Cameroun.
Donald W BowdenCenter for Diabetes Research, Department of Biochemistry, Wake Forest School of Medicine, Winston-Salem, North Carolina.
William C BromleyCenter for Human Genetics, Bar Harbor, Maine.
Donald L BudenzDepartment of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Trevor R CarmichaelDivision of Ophthalmology, Department of Neurosciences, University of the Witwatersrand, Johannesburg, South Africa.
Pratap ChallaDepartment of Ophthalmology, Duke University, Durham, North Carolina.
Yii-Der Ida ChenThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California.
Chimdi M Chuka-OkosaUniversity of Nigeria Teaching Hospital, Ituku Ozalla, Enugu, Nigeria.
Jessica N Cooke BaileyDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, Ohio.
Vital Paulino CostaDepartment of Ophthalmology, Faculty of Medical Sciences, University of Campinas, Campinas, Brazil.
Dianne A CruzDepartment of Psychiatry and Behavioral Sciences, Duke University, Durham, North Carolina.
Harvey DuBinerClayton Eye Care Center Management Inc, Marrow, Georgia.
John F ErvinKathleen Price Bryan Brain Bank and Biorepository, Department of Neurology, Duke University, Durham, North Carolina.
Robert M FeldmanMcGovern Medical School, Ruiz Department of Ophthalmology & Visual Science, The University of Texas Health Science Center at Houston, Houston.
Miles Flamme-WieseCarver College of Medicine, Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City.
Douglas E GaasterlandThe Emmes Corporation, Rockville, Maryland.
Sarah J GarnaiDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor.
Christopher A GirkinDepartment of Ophthalmology and Visual Sciences, University of Alabama at Birmingham.
Nouhoum GuirouInstitut d'Ophtalmologie Tropicale de l'Afrique, Bamako, Mali.
Xiuqing GuoThe Institute for Translational Genomics and Population Sciences, Department of Pediatrics, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, California.
Jonathan L HainesDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, Ohio.
Christopher J HammondSection of Academic Ophthalmology, School of Life Course Sciences, FoLSM, King's College London, London, United Kingdom.
Leon HerndonDepartment of Ophthalmology, Duke University, Durham, North Carolina.
Thomas J HoffmannDepartment of Epidemiology and Biostatistics, University of California at San Francisco.
Christine M HuletteDepartment of Pathology, Duke University, Durham, North Carolina.
Abba HydaraSheikh Zayed Regional Eye Care Centre, Kanifing, The Gambia.
Robert P IgoDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, Ohio.
Eric JorgensonDivision of Research, Kaiser Permanente Northern California, Oakland.
Joyce KabweDepartment of Ophthalmology, St Joseph Hospital, Kinshasa, Limete, Democratic Republic of the Congo.
Ngoy Janvier KilangalangaDepartment of Ophthalmology, St Joseph Hospital, Kinshasa, Limete, Democratic Republic of the Congo.
Nkiru Kizor-AkaraiweDepartment of Ophthalmology, ESUT Teaching Hospital Parklane, Enugu, Nigeria.
Rachel W KuchteyDepartment of Ophthalmology and Visual Sciences, Vanderbilt University Medical Center, Nashville, Tennessee.
Hasnaa LamariClinique Spécialisée en Ophtalmologie Mohammedia, Mohammedia, Morocco.
Zheng LiGenome Institute of Singapore, Singapore.
Jeffrey M LiebmannBernard and Shirlee Brown Glaucoma Research Laboratory, Harkness Eye Institute, Columbia University Medical Center, New York, New York.
Yutao LiuCellular Biology and Anatomy, Augusta University, Augusta, Georgia.
Ruth J F LoosThe Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.
Monica B MeloCenter for Molecular Biology and Genetic Engineering, University of Campinas, Campinas, Brazil.
Sayoko E MoroiDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor.
Joseph M MsosaLions Sight-First Eye Hospital, Kamuzu Central Hospital, Lilongwe, Malawi.
Robert F MullinsCarver College of Medicine, Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City.
Girish NadkarniThe Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.
Abdoulaye NapoInstitut d'Ophtalmologie Tropicale de l'Afrique, Bamako, Mali.
Maggie C Y NgCenter for Diabetes Research, Department of Biochemistry, Wake Forest School of Medicine, Winston-Salem, North Carolina.
Hugo Freire NunesCenter for Molecular Biology and Genetic Engineering, University of Campinas, Campinas, Brazil.
Ebenezer Obeng-NyarkohCenter for Human Genetics, Bar Harbor, Maine.
Anthony OkekeNigerian Navy Reference Hospital, Ojo, Lagos, Nigeria.
Suhanya OkekeDepartment of Ophthalmology, ESUT Teaching Hospital Parklane, Enugu, Nigeria.
Olusegun OlaniyiNational Eye Centre, Kaduna, Nigeria.
Olusola OlawoyeDepartment of Ophthalmology, University of Ibadan, Ibadan, Nigeria.
Mariana Borges OliveiraCenter for Molecular Biology and Genetic Engineering, University of Campinas, Campinas, Brazil.
Louise R PasqualeDepartment of Ophthalmology, Icahn School of Medicine at Mount Sinai, New York, New York.
Rodolfo A Perez-GrossmannInstituto de Glaucoma y Catarata, Lima, Peru.
Margaret A Pericak-VanceJohn P Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, Florida.
Xue QinDuke Molecular Physiology Institute, Duke University, Durham, North Carolina.
Michele RamsaySydney Brenner Institute for Molecular Bioscience, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
Serge ResnikoffBrien Holden Vision Institute, Sydney, Australia.
Julia E RichardsDepartment of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor.
Rui Barroso SchimitiHoftalon Hospital, Londrina, Brazil.
Kar Seng SimGenome Institute of Singapore, Singapore.
William E SponselSan Antonio Eye Health, San Antonio, Texas.
Paulo Vinicius SvidnickiCenter for Molecular Biology and Genetic Engineering, University of Campinas, Campinas, Brazil.
Alberta A H J ThiadensDepartment of Epidemiology, Erasmus MC, Rotterdam, the Netherlands.
Nkechinyere J UcheUniversity of Nigeria Teaching Hospital, Ituku Ozalla, Enugu, Nigeria.
Cornelia M van DuijnDepartment of Epidemiology, Erasmus MC, Rotterdam, the Netherlands.
José Paulo Cabral de VasconcellosDepartment of Ophthalmology, Faculty of Medical Sciences, University of Campinas, Campinas, Brazil.
Janey L WiggsHarvard University Medical School, Boston, Massachusetts.
Linda M ZangwillShiley Eye Institute, Hamilton Glaucoma Center, Department of Ophthalmology, University of California, San Diego, La Jolla.
Neil RischDepartment of Epidemiology and Biostatistics, University of California at San Francisco.
Dan MileaSingapore Eye Research Institute, Singapore.
Adeyinka AshayeDepartment of Ophthalmology, University of Ibadan, Ibadan, Nigeria.
Caroline C W KlaverDepartment of Epidemiology, Erasmus MC, Rotterdam, the Netherlands.
Robert N WeinrebShiley Eye Institute, Hamilton Glaucoma Center, Department of Ophthalmology, University of California, San Diego, La Jolla.
Allison E Ashley KochDepartment of Medicine, Duke University, Durham, North Carolina.
John H FingertCarver College of Medicine, Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City.
Chiea Chuen KhorSingapore Eye Research Institute, Singapore.
Duke University · USUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Iowa · USCase Western Reserve University · USEnugu State University of Science and Technology · NGGenome Institute of Singapore · SGIcahn School of Medicine at Mount Sinai · USNational Eye Centre · NGUniversity of Michigan–Ann Arbor · USUniversity of the Witwatersrand · ZACenter for Human Genetics · USHarbor–UCLA Medical Center · USInstitut du Sahel · MLKinshasa General Hospital · CDSingapore Eye Research Institute · SGUniversity of California, San Diego · USUniversity of California, San Francisco · USUniversity of Ibadan · NGUniversity of Nigeria Teaching Hospital · NGWake Forest University · US

Funding

UCLA Clinical Translational Science InstituteUL1TR001881 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARLEEN F. BROWN, ARASH NAEIM · 2016 to 2026
$118.1M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Andrea L Hevener · 2003 to 2026
$40.4M
Anti-Amyloid Treatment in Asymptomatic Alzheimer's Disease (A4) Open-Label Extension StudyR01AG063689 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI AISEN, PAUL S., SPERLING, REISA A. · 2019 to 2024
$30.8M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Janey L Wiggs · 2002 to 2026
$15.1M
Vision BiostatisticsP30EY022589 · NEI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LINDA M ZANGWILL · 2012 to 2026
$10.3M
NEUROPATHOLOGY COREP30AG028377 · NIA · DUKE UNIVERSITY · PI WELSH-BOHMER, KATHLEEN ANNE · 2006 to 2011
$9.6M
Gene-Environment Interactions in GlaucomaR01EY015473 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI PASQUALE, LOUIS ROBERT · 2005 to 2021
$8.3M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
Stem Cell and Organoid CoreP30EY025580 · NEI · UNIVERSITY OF IOWA · PI Budd A Tucker · 2016 to 2026
$6.9M
Targeting Tissue Biomechanics for Treatment of GlaucomaR01EY020894 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KUCHTEY, RACHEL W · 2010 to 2025
$6.4M
xADAGES III: Contribution of genotype to glaucoma phenotype in African AmericansR01EY023704 · NEI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROTTER, JEROME I, WEINREB, ROBERT N · 2013 to 2017
$6.3M
NCATS NIH HHS UL1 TR001881NEI NIH HHS P30 EY014104NEI NIH HHS P30 EY022589NEI NIH HHS P30 EY025580NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY010008NEI NIH HHS R01 EY015473NEI NIH HHS R01 EY019869NEI NIH HHS R01 EY020894NEI NIH HHS R01 EY021818NEI NIH HHS R01 EY022305NEI NIH HHS R01 EY023512NEI NIH HHS R01 EY023704NEI NIH HHS R01 EY027004NEI NIH HHS R21 EY028671NEI NIH HHS R21 EY029609NHGRI NIH HHS U01 HG004728NHGRI NIH HHS U01 HG007417NHGRI NIH HHS U54 HG009826NIA NIH HHS P30 AG028377NIA NIH HHS R01 AG063689NIDDK NIH HHS P30 DK063491NIDDK NIH HHS R01 DK053591NIDDK NIH HHS R01 DK066358NIDDK NIH HHS R01 DK070941NIDDK NIH HHS R01 DK087914NIDDK NIH HHS R01 DK101855NIDDK NIH HHS R01 DK107786NIDDK NIH HHS R01 DK110113NIDDK NIH HHS U01 DK105556NIGMS NIH HHS T32 GM007337RRD VA I01 RX001481
6 · The paper itself

Abstract

Importance: Primary open-angle glaucoma presents with increased prevalence and a higher degree of clinical severity in populations of African ancestry compared with European or Asian ancestry. Despite this, individuals of African ancestry remain understudied in genomic research for blinding disorders. Objectives: To perform a genome-wide association study (GWAS) of African ancestry populations and evaluate potential mechanisms of pathogenesis for loci associated with primary open-angle glaucoma. Design, Settings, and Participants: A 2-stage GWAS with a discovery data set of 2320 individuals with primary open-angle glaucoma and 2121 control individuals without primary open-angle glaucoma. The validation stage included an additional 6937 affected individuals and 14 917 unaffected individuals using multicenter clinic- and population-based participant recruitment approaches. Study participants were recruited from Ghana, Nigeria, South Africa, the United States, Tanzania, Britain, Cameroon, Saudi Arabia, Brazil, the Democratic Republic of the Congo, Morocco, Peru, and Mali from 2003 to 2018. Individuals with primary open-angle glaucoma had open iridocorneal angles and displayed glaucomatous optic neuropathy with visual field defects. Elevated intraocular pressure was not included in the case definition. Control individuals had no elevated intraocular pressure and no signs of glaucoma. Exposures: Genetic variants associated with primary open-angle glaucoma. Main Outcomes and Measures: Presence of primary open-angle glaucoma. Genome-wide significance was defined as P < 5 × 10-8 in the discovery stage and in the meta-analysis of combined discovery and validation data. Results: A total of 2320 individuals with primary open-angle glaucoma (mean [interquartile range] age, 64.6 [56-74] years; 1055 [45.5%] women) and 2121 individuals without primary open-angle glaucoma (mean [interquartile range] age, 63.4 [55-71] years; 1025 [48.3%] women) were included in the discovery GWAS. The GWAS discovery meta-analysis demonstrated association of variants at amyloid-β A4 precursor protein-binding family B member 2 (APBB2; chromosome 4, rs59892895T>C) with primary open-angle glaucoma (odds ratio [OR], 1.32 [95% CI, 1.20-1.46]; P = 2 × 10-8). The association was validated in an analysis of an additional 6937 affected individuals and 14 917 unaffected individuals (OR, 1.15 [95% CI, 1.09-1.21]; P < .001). Each copy of the rs59892895*C risk allele was associated with increased risk of primary open-angle glaucoma when all data were included in a meta-analysis (OR, 1.19 [95% CI, 1.14-1.25]; P = 4 × 10-13). The rs59892895*C risk allele was present at appreciable frequency only in African ancestry populations. In contrast, the rs59892895*C risk allele had a frequency of less than 0.1% in individuals of European or Asian ancestry. Conclusions and Relevance: In this genome-wide association study, variants at the APBB2 locus demonstrated differential association with primary open-angle glaucoma by ancestry. If validated in additional populations this finding may have implications for risk assessment and therapeutic strategies.

Indexed as

Genome-Wide Association StudyPolymorphism, Single NucleotideAdaptor Proteins, Signal TransducingAgedAmyloid beta-PeptidesBlack PeopleCase-Control StudiesFemaleGenetic Predisposition to DiseaseGenotypeGlaucoma, Open-AngleHumansImmunohistochemistryMaleMeta-Analysis as TopicMiddle AgedAdaptor Proteins, Signal TransducingAmyloid beta-PeptidesAPBB2 protein, human

Identifiers

PMID31688885
PMCPMC6865235
OpenAlexW2985070208

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