Evidence map›Paper›PMID 31685548›Full record

ArticleMolecular and cellular biology2020

An RB-Condensin II Complex Mediates Long-Range Chromosome Interactions and Influences Expression at Divergently Paired Genes.

Aren E Marshall, Charles A Ishak, Frederick A Dick

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Aren E MarshallLondon Regional Cancer Program, Lawson Health Research Institute, London, Ontario, Canada.
Charles A IshakLondon Regional Cancer Program, Lawson Health Research Institute, London, Ontario, Canada.
Frederick A DickLondon Regional Cancer Program, Lawson Health Research Institute, London, Ontario, Canada fdick@uwo.ca.
Western University · CA

Funding

CIHR MOP 324579
6 · The paper itself

Abstract

Interphase chromosomes are organized into topologically associated domains in order to establish and maintain integrity of transcriptional programs that remain poorly understood. Here, we show that condensin II and TFIIIC are recruited to bidirectionally transcribed promoters by a mechanism that is dependent on the retinoblastoma (RB) protein. Long-range chromosome contacts are disrupted by loss of condensin II loading, which leads to altered expression at bidirectional gene pairs. This study demonstrates that mammalian condensin II functions to organize long-range chromosome contacts and regulate transcription at specific genes. In addition, RB dependence of condensin II suggests that widespread misregulation of chromosome contacts and transcriptional alterations are a consequence of RB mutation.

Indexed as

Adenosine TriphosphatasesAnimalsCells, CulturedChromosomesDNA-Binding ProteinsEpigenesis, GeneticInterphaseMiceMultiprotein ComplexesPromoter Regions, GeneticRetinoblastoma ProteinTranscriptional ActivationTranscription Factors, TFIIITranscription Factor TFIIICAdenosine Triphosphatasescondensin complexesDNA-Binding ProteinsMultiprotein ComplexesRetinoblastoma ProteinTranscription Factors, TFIIITranscription Factor TFIIICchromosome architecturechromosome organizationcondensin IIepigeneticsgene expressionregulation of gene expressionretinoblastoma proteinTFIIIC

Identifiers

PMID31685548
PMCPMC6944469
OpenAlexW2982550604

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.