Evidence map›Paper›PMID 31684939›Full record

ArticleBMC veterinary research2019

Genetic characterisation of staphylococci of food-producing animals in Senegal. PVL detection among MSSA.

Olouwafemi Mistourath Mama, Modou Dieng, Bocar Hanne, Laura Ruiz-Ripa, Codou Gueye Mar Diop, Carmen Torres

Abstract read
In one paragraph

Article in BMC veterinary research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Ecology and Genetic Lineages of NasalPathogens (Basel, Switzerland) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Olouwafemi Mistourath MamaDepartamento Agricultura y Alimentación, Área de Bioquímica y Biología Molecular, Universidad de La Rioja, Madre de Dios 51, 26006, Logroño, Spain.
Modou DiengLAE/ Ecole Supérieure polytechnique de Dakar, UCAD, Dakar, Sénégal.
Bocar HanneService Vétérinaire, Société de gestion des abattoirs du Sénégal, Dakar, Sénégal.
Laura Ruiz-RipaDepartamento Agricultura y Alimentación, Área de Bioquímica y Biología Molecular, Universidad de La Rioja, Madre de Dios 51, 26006, Logroño, Spain.
Codou Gueye Mar DiopLAE/ Ecole Supérieure polytechnique de Dakar, UCAD, Dakar, Sénégal.
Carmen TorresDepartamento Agricultura y Alimentación, Área de Bioquímica y Biología Molecular, Universidad de La Rioja, Madre de Dios 51, 26006, Logroño, Spain. carmen.torres@unirioja.es.ORCID http://orcid.org/0000-0003-3709-1690

Funding

Agencia Estatal de Investigación (AEI) of Spain and Fondo Europeo de Desarrollo Regional (FEDER) SAF2016-76571-R
6 · The paper itself

Abstract

backgroundFood-producing animals can be a vehicle for staphylococcal species as well as their virulence and antimicrobial resistance genes. This work aimed to analyse the diversity of staphylococcal species in food-producing animals in Dakar/Senegal, and to determine the antimicrobial resistance phenotype/genotype and virulence factors of recovered isolates. Nasal samples of 149 cows and 199 chickens (348 animals) were collected from one slaughterhouse and a local market respectively, and were inoculated on selective media for staphylococci recovery. For S. aureus isolates, molecular typing (spa-type, MLST) was performed by PCR/sequencing, and the presence of 27 virulence genes (exfoliative and toxic shock toxins, PVL, haemolysins and enterotoxins) as well as the gene scn were analysed by PCR. Susceptibility to twelve antibiotics was studied by disc-diffusion method for all staphylococci; the resistance genes involved were screened by PCR.

resultsStaphylococcus spp. was present in 3 and 26.8% of chicken and cow nasal samples, respectively. Seven S. aureus isolates and forty isolates of other staphylococcal species were identified. S. aureus isolates were recovered from cow (n = 6) and chicken (n = 1) samples, belonging to four genetic lineages: t084/ST15 (n = 1); t10579/ST291 (n = 3); t355, t4690/ST152 (n = 2); and t6618/ST6 (n = 1). All S. aureus were methicillin-susceptible, penicillin-resistant (blaZ), and two of them were also tetracycline-resistant [tet(K)]. All the isolates carried at least one of the virulence genes tested. The PVL genes were detected in three ST15 and ST152 isolates. They all harboured haemolysins encoding genes and lacked the scn gene. The other staphylococci recovered were S. sciuri (n = 16), S. simulans (n = 11), S. hyicus (n = 5), S. haemolyticus (n = 4), S. chromogenes (n = 3), and S. hominis (n = 1); they were all methicillin-susceptible and 27.5% tetracycline-resistant [tet(K) and tet(L)].

conclusionsA low prevalence of S. aureus was detected among food-producing animals, all susceptible to methicillin. However, the presence of virulence genes (lukF/lukS-PV, eta, tst, sea and see) is worrisome to the extent that they could be transferred to derived food and therefore, to humans.

Indexed as

AnimalsBacterial ProteinsBacterial ToxinsCattleChickensExotoxinsGene Expression Regulation, BacterialLeukocidinsMembrane ProteinsMethicillinPrevalenceSenegalStaphylococcal InfectionsStaphylococcusBacterial ProteinsBacterial ToxinsExotoxinsLeukocidinsMembrane ProteinsMethicillinpagC protein, Salmonella typhimuriumPanton-Valentine leukocidin

Identifiers

PMID31684939
PMCPMC6829939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.