Evidence map›Paper›PMID 31683932›Full record

ArticleToxins2019

Hadrurid Scorpion Toxins: Evolutionary Conservation and Selective Pressures.

Carlos E Santibáñez-López, Matthew R Graham, Prashant P Sharma, Ernesto Ortiz, Lourival D Possani

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Carlos E Santibáñez-LópezDepartment of Biology, Eastern Connecticut State University, 83 Windham St. Willimantic, CT 06266, USA. santibanezlopezc@easternct.edu.ORCID 0000-0001-6062-282X
Matthew R GrahamDepartment of Biology, Eastern Connecticut State University, 83 Windham St. Willimantic, CT 06266, USA. grahamm@easternct.edu.
Prashant P SharmaDepartment of Integrative Biology, University of Wisconsin-Madison, 430 Lincoln Drive, Madison, WI 53706, USA. prashant.sharma@wisc.edu.
Ernesto OrtizDepartamento de Medicina Molecular y Bioprocesos, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Cuernavaca, Morelos 62210, Mexico. erne@ibt.unam.mx.ORCID 0000-0002-8713-0224
Lourival D PossaniDepartamento de Medicina Molecular y Bioprocesos, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Avenida Universidad 2001, Cuernavaca, Morelos 62210, Mexico. possani@ibt.unam.mx.ORCID 0000-0001-6357-2661
Eastern Connecticut State University · USUniversidad Nacional Autónoma de México · MXUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Scorpion toxins are thought to have originated from ancestral housekeeping genes that underwent diversification and neofunctionalization, as a result of positive selection. Our understanding of the evolutionary origin of these peptides is hindered by the patchiness of existing taxonomic sampling. While recent studies have shown phylogenetic inertia in some scorpion toxins at higher systematic levels, evolutionary dynamics of toxins among closely related taxa remain unexplored. In this study, we used new and previously published transcriptomic resources to assess evolutionary relationships of closely related scorpions from the family Hadruridae and their toxins. In addition, we surveyed the incidence of scorpine-like peptides (SLP, a type of potassium channel toxin), which were previously known from 21 scorpion species. We demonstrate that scorpine-like peptides exhibit gene duplications. Our molecular analyses demonstrate that only eight sites of two SLP copies found in scorpions are evolving under positive selection, with more sites evolving under negative selection, in contrast to previous findings. These results show evolutionary conservation in toxin diversity at shallow taxonomic scale.

Indexed as

Evolution, MolecularTranscriptomeAnimalsConserved SequenceDefensinsGene Expression ProfilingLikelihood FunctionsPhylogenyScorpionsScorpion VenomsSequence AlignmentSequence Homology, Amino AcidDefensinsscorpineScorpion Venomsevolutionary shiftsHadruridaenegative selectionphylogenomicsvenom transcriptome

Identifiers

PMID31683932
PMCPMC6891616
OpenAlexW2983210413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.