Evidence map›Paper›PMID 31682625›Full record

ArticlePloS one2019

Molecular validation of clinical Pantoea isolates identified by MALDI-TOF.

Craig D Soutar, John Stavrinides

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. The First Infant Bloodstream Infection Caused byInfection and drug resistance · 2025
    Article
  7. Review
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  9. Whole genome sequencing and characterization ofFrontiers in microbiology · 2024
    Article
  10. Bloodstream Infections byAntibiotics (Basel, Switzerland) · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. First Report of Pathogenic BacteriumPathogens (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Craig D SoutarDepartment of Biology, University of Regina, Regina, Saskatchewan, Canada.ORCID 0000-0002-0532-4771
John StavrinidesDepartment of Biology, University of Regina, Regina, Saskatchewan, Canada.ORCID 0000-0001-5551-0946
University of Regina · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Enterobacterial genus Pantoea contains both free-living and host-associating species, with considerable debate as to whether documented reports of human infections by members of this species group are accurate. MALDI-TOF-based identification methods are commonly used in clinical laboratories as a rapid means of identification, but its reliability for identification of Pantoea species is unclear. In this study, we carried out cpn60-based molecular typing of 54 clinical isolates that had been identified as Pantoea using MALDI-TOF and other clinical typing methods. We found that 24% had been misidentified, and were actually strains of Citrobacter, Enterobacter, Kosakonia, Klebsiella, Pseudocitrobacter, members of the newly described Erwinia gerundensis, and even several unclassified members of the Enterobacteriaceae. The 40 clinical strains that were confirmed to be Pantoea were identified as Pantoea agglomerans, Pantoea allii, Pantoea dispersa, Pantoea eucalypti, and Pantoea septica as well as the proposed species group, Pantoea latae. Some species groups considered largely environmental or plant-associated, such as P. allii and P. eucalypti were also among clinical specimens. Our results indicate that MALDI-TOF-based identification methods may misidentify strains of the Enterobacteriaceae as Pantoea.

Indexed as

Bacterial Typing TechniquesDiagnostic ErrorsEnterobacteriaceae InfectionsHumansPantoeaPhylogenyPlantsReproducibility of ResultsSpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Identifiers

PMID31682625
PMCPMC6827907
OpenAlexW2989346780

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.