Evidence map›Paper›PMID 31678912›Full record

ArticleiScience2019

G-quadruplex Structures Contribute to Differential Radiosensitivity of the Human Genome.

Nitu Kumari, Supriya V Vartak, Sumedha Dahal, Susmita Kumari, Sagar S Desai, Vidya Gopalakrishnan, Bibha Choudhary, Sathees C Raghavan

Open access · goldAbstract read
In one paragraph

Article in iScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. CpG Methylation Protects DNA against Ionizing Radiation.The journal of physical chemistry. B · 2025
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Mutations atMolecular and cellular biology · 2024
    Article
  11. Review
  12. Article
  13. Complete genome sequence ofFrontiers in bioengineering and biotechnology · 2023
    Article
  14. Review
  15. Article
  16. G-Quadruplex Recognition by DARPIns through Epitope/Paratope Analogy.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Nitu KumariDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Supriya V VartakDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Sumedha DahalDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Susmita KumariDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India.
Sagar S DesaiInstitute of Bioinformatics and Applied Biotechnology, Electronics City, Bangalore 560100, India; Manipal Academy of Higher Education, Manipal, Karnataka, 576104, India.
Vidya GopalakrishnanDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India; Department of Zoology, St. Joseph's College, Irinjalakkuda, Kerala, 680121, India.
Bibha ChoudharyInstitute of Bioinformatics and Applied Biotechnology, Electronics City, Bangalore 560100, India.
Sathees C RaghavanDepartment of Biochemistry, Indian Institute of Science, Bangalore 560012, India. Electronic address: sathees@iisc.ac.in.
Indian Institute of Science Bangalore · INInstitute of Bioinformatics and Applied Biotechnology · INManipal Academy of Higher Education · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA, the fundamental unit of human cell, generally exists in Watson-Crick base-paired B-DNA form. Often, DNA folds into non-B forms, such as four-stranded G-quadruplexes. It is generally believed that ionizing radiation (IR) induces DNA strand-breaks in a random manner. Here, we show that regions of DNA enriched in G-quadruplex structures are less sensitive to IR compared with B-DNA in vitro and inside cells. Planar G-quartet of G4-DNA is shielded from IR-induced free radicals, unlike single- and double-stranded DNA. Whole-genome sequence analysis and real-time PCR reveal that genomic regions abundant in G4-DNA are protected from radiation-induced breaks and can be modulated by G4 stabilizers. Thus, our results reveal that formation of G4 structures contribute toward differential radiosensitivity of the human genome.

Indexed as

BiochemistryBiological SciencesCell BiologyMolecular Biology

Identifiers

PMID31678912
PMCPMC6838516
OpenAlexW2981981975

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.