ArticleThe ISME journal2020
Spatial and temporal axes impact ecology of the gut microbiome in juvenile European lobster (Homarus gammarus).
Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
21 citing papers in PubMed.
- Article
- The impacts of biological invasions.Biological reviews of the Cambridge Philosophical Society · 2026Review
- Factors influencing preterm infant microbiota and their role in wheezing development.Pediatric research · 2026Article
- The bacterial community composition of American Lobster (Homarus americanus) embryos and recently hatched larvae held under experimental laboratory conditions.Scientific reports · 2026Article
- A review: climate, contaminants and disease dynamics in lobster speciesFrontiers in physiology · 2026Review
- Microbiome dynamics associated with Hematodinium sp. infection in Norway lobster (Nephrops norvegicus).Animal microbiome · 2025Article
- Comparative gut microbiome research through the lens of ecology: theoretical considerations and best practices.Biological reviews of the Cambridge Philosophical Society · 2025Review
- Environmental dispersal and host priority effect alternatively dominate intestinal microbiota succession of cultured shrimp along with host development.Marine life science & technology · 2024Article
- Understanding the role of microbes in health and disease of farmed aquatic organisms.Marine life science & technology · 2024Article
- Tolerance to environmental pollution in the freshwater crustacean Asellus aquaticus: A role for the microbiome.Environmental microbiology reports · 2024Article
- Spatial compartmentalisation of bacteria in phoronid microbiomes.Scientific reports · 2023Article
- Article
- Effects of rearing system and antibiotic treatment on immune function, gut microbiota and metabolites of broiler chickens.Journal of animal science and biotechnology · 2022Article
- Microbiomes of microscopic marine invertebrates do not reveal signatures of phylosymbiosis.Nature microbiology · 2022Article
- Habitat heterogeneity induced by pyrogenic organic matter in wildfire-perturbed soils mediates bacterial community assembly processes.The ISME journal · 2021Article
- Gut Microbiomes of Freshwater Mussels (Unionidae) Are Taxonomically and Phylogenetically Variable across Years but Remain Functionally Stable.Microorganisms · 2021Article
- Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota.NPJ biofilms and microbiomes · 2021Article
- Dietary Fiber Influences Bacterial Community Assembly Processes in the Gut Microbiota of Durco × Bamei Crossbred Pig.Frontiers in microbiology · 2021Article
- Characterizing the cirri and gut microbiomes of the intertidal barnacle Semibalanus balanoides.Animal microbiome · 2020Article
- Comparable Ecological Processes Govern the Temporal Succession of Gut Bacteria and Microeukaryotes as Shrimp Aged.Microbial ecology · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
Microbial communities within the gut can markedly impact host health and fitness. To what extent environmental influences affect the differential distribution of these microbial populations may therefore significantly impact the successful farming of the host. Using a sea-based container culture (SBCC) system for the on-growing of European lobster (Homarus gammarus), we tracked the bacterial gut microbiota over a 1-year period. We compared these communities with lobsters of the same cohort, retained in a land-based culture (LBC) system to assess the effects of the culture environment on gut bacterial assemblage and describe the phylogenetic structure of the microbiota to compare deterministic and stochastic assembly across both environments. Bacterial gut communities from SBCCs were generally more phylogenetically clustered, and therefore deterministically assembled, compared to those reared in land-based systems. Lobsters in SBCCs displayed significantly more species-rich and species-diverse gut microbiota compared to those retained in LBC. A reduction in the bacterial diversity of the gut was also associated with higher infection prevalence of the enteric viral pathogen Homarus gammarus nudivirus (HgNV). SBCCs may therefore benefit the overall health of the host by promoting the assembly of a more diverse gut bacterial community and reducing the susceptibility to disease.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.