Evidence map›Paper›PMID 31674029›Full record

ArticlePrenatal diagnosis2020

Noninvasive prenatal paternity testing by means of SNP-based targeted sequencing.

Jacqueline Chor Wing Tam, Yee Man Chan, Shui Ying Tsang, Chung In Yau, Shuk Ying Yeung, Ka Ki Au, Chun Kin Chow

Open access · bronzeAbstract read
In one paragraph

Article in Prenatal diagnosis, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
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  3. Noninvasive Prenatal Paternity Testing: A Review on Genetic Markers.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jacqueline Chor Wing TamDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.ORCID 0000-0003-3004-9043
Yee Man ChanDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Shui Ying TsangDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Chung In YauDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Shuk Ying YeungDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Ka Ki AuDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Chun Kin ChowDepartment of R&D, Medtimes Medical Group Limited, Kwai Chung, Hong Kong.
Kwai Chung Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo develop a method for noninvasive prenatal paternity testing based on targeted sequencing of single nucleotide polymorphisms (SNPs).

methodSNPs were selected based on population genetics data. Target-SNPs in cell-free DNA extracted from maternal blood (maternal cfDNA) were analyzed by targeted sequencing wherein target enrichment was based on multiplex amplification using QIAseq Targeted DNA Panels with Unique Molecular Identifiers. Fetal SNP genotypes were called using a novel bioinformatics algorithm, and the combined paternity indices (CPIs) and resultant paternity probabilities were calculated.

resultsFetal SNP genotypes obtained from targeted sequencing of maternal cfDNA were 100% concordant with those from amniotic fluid-derived fetal genomic DNA. From an initial panel of 356 target-SNPs, an average of 148 were included in paternity calculations in 15 family trio cases, generating paternity probabilities of greater than 99.9999%. All paternity results were confirmed by short-tandem-repeat analysis. The high specificity of the methodology was validated by successful paternity discrimination between biological fathers and their siblings and by large separations between the CPIs calculated for the biological fathers and those for 60 unrelated men.

conclusionThe novel method is highly effective, with substantial improvements over similar approaches in terms of reduced number of target-SNPs, increased accuracy, and reduced costs.

Indexed as

PaternityAlgorithmsCell-Free Nucleic AcidsComputational BiologyFemaleHumansMaleMicrosatellite RepeatsNoninvasive Prenatal TestingPolymorphism, Single NucleotidePregnancyCell-Free Nucleic Acids

Identifiers

PMID31674029
PMCPMC7154534
OpenAlexW2987659533

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.