Evidence map›Paper›PMID 31673120›Full record

ArticleScientific reports2019

Phylogenetic evidence of the intercontinental circulation of a Canine distemper virus lineage in the Americas.

July Duque-Valencia, Norma R Forero-Muñoz, Francisco J Díaz, Elisabete Martins, Paola Barato, Julian Ruiz-Saenz

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. An alternative genomic target for proper phylogenetic classification of canine distemper virus (Morbillivirus canis).Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
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  11. Genetic Characterization ofTransboundary and emerging diseases · 2024
    Article
  12. Seroconversion in Galapagos Sea Lions (Animals : an open access journal from MDPI · 2023
    Article
  13. Identification of a new polymorphism on the wild-type canine distemper virus genome: could this contribute to vaccine failures?Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
  14. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

July Duque-ValenciaGrupo de Investigación en Ciencias Animales - GRICA, Facultad de Medicina Veterinaria y Zootecnia, Universidad Cooperativa de Colombia, Bucaramanga, Colombia.
Norma R Forero-MuñozCorporación Patología Veterinaria (Corpavet), Bogotá, Colombia.
Francisco J DíazGrupo Inmunovirología, Facultad de Medicina, Universidad de Antioquia, Calle 70 No. 52-21, Medellín, Colombia.
Elisabete MartinsCorporación Patología Veterinaria (Corpavet), Bogotá, Colombia.
Paola BaratoCorporación Patología Veterinaria (Corpavet), Bogotá, Colombia.
Julian Ruiz-SaenzGrupo de Investigación en Ciencias Animales - GRICA, Facultad de Medicina Veterinaria y Zootecnia, Universidad Cooperativa de Colombia, Bucaramanga, Colombia. julian.ruizs@campusucc.edu.co.ORCID http://orcid.org/0000-0002-1447-1458
Universidad Cooperativa de Colombia · COUniversidad de Antioquia · COUniversity of Lisbon · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Canine distemper virus (CDV) is the cause of a multisystem disease in domestic dogs and wild animals, infecting more than 20 carnivore and non-carnivore families and even infecting human cell lines in in vitro conditions. Phylogenetic classification based on the hemagglutinin gene shows 17 lineages with a phylogeographic distribution pattern. In Medellín (Colombia), the lineage South America-3 is considered endemic. Phylogenetic studies conducted in Ecuador using fragment coding for the fusion protein signal peptide (Fsp) characterized a new strain belonging to a different lineage. For understanding the distribution of the South America-3 lineage in the north of the South American continent, we characterized CDV from three Colombian cities (Medellín, Bucaramanga, and Bogotá). Using phylogenetic analysis of the hemagglutinin gene and the Fsp region, we confirmed the circulation of CDV South America-3 in different areas of Colombia. We also described, for the first time to our knowledge, the circulation of a new lineage in Medellín that presents a group monophyletic with strains previously characterized in dogs in Ecuador and in wildlife and domestic dogs in the United States, for which we propose the name "South America/North America-4" due its intercontinental distribution. In conclusion, our results indicated that there are at least four different CDV lineages circulating in domestic dogs in South America: the Europe/South America-1 lineage circulating in Brazil, Uruguay, and Argentina; the South America-2 lineage restricted to Argentina; the South America-3 lineage, which has only been reported in Colombia; and lastly an intercontinental lineage present in Colombia, Ecuador, and the United States, referred to here as the "South America/North America-4" lineage.

Indexed as

Genetic LinkageAnimalsBayes TheoremDistemper Virus, CanineDogsFemaleGlycopeptidesHemagglutinins, ViralMaleNorth AmericaPhylogenyPhylogeographyRNA, ViralSequence Analysis, RNASouth AmericaGlycopeptidesHemagglutinins, ViralRNA, Viral

Identifiers

PMID31673120
PMCPMC6823503
OpenAlexW2982682752

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.