Evidence map›Paper›PMID 31671738›Full record

ArticleInternational journal of molecular sciences2019

Post-Translational Deimination of Immunological and Metabolic Protein Markers in Plasma and Extracellular Vesicles of Naked Mole-Rat (

Matthew E Pamenter, Pinar Uysal-Onganer, Kenny W Huynh, Igor Kraev, Sigrun Lange

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Extracellular Vesicles in Veterinary Medicine.Animals : an open access journal from MDPI · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. The Proteome and Citrullinome ofInternational journal of molecular sciences · 2021
    Article
  12. Alternative Animal Models of Aging Research.Frontiers in molecular biosciences · 2021
    Review
  13. Article
  14. Article
  15. Putative Roles for Peptidylarginine Deiminases in COVID-19.International journal of molecular sciences · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Deimination Protein Profiles inFrontiers in immunology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Matthew E PamenterDepartment of Biology, University of Ottawa, Ottawa, ON K1N 6N5, Canada. mpamenter@uottawa.ca.
Pinar Uysal-OnganerCancer Research Group, School of Life Sciences, College of Liberal Arts and Sciences, University of Westminster, London W1W 6 UW, UK. P.onganer@westminster.ac.uk.ORCID 0000-0003-3190-8831
Kenny W HuynhDepartment of Biology, University of Ottawa, Ottawa, ON K1N 6N5, Canada. khuyn034@uottawa.ca.ORCID 0000-0002-3504-0614
Igor KraevElectron Microscopy Suite, Faculty of Science, Technology, Engineering and Mathematics, Open University, Walton Hall, Milton Keynes MK7 6AA, UK. igor.kraev@open.ac.uk.ORCID 0000-0003-1822-278X
Sigrun LangeTissue Architecture and Regeneration Research Group, School of Life Sciences, College of Liberal Arts and Sciences, University of Westminster, London W1W 6 UW, UK. S.Lange@westminster.ac.uk.ORCID 0000-0002-7193-3102
University of Ottawa · CAUniversity of Westminster · GBThe Open University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Naked mole-rats are long-lived animals that show unusual resistance to hypoxia, cancer and ageing. Protein deimination is an irreversible post-translational modification caused by the peptidylarginine deiminase (PAD) family of enzymes, which convert arginine into citrulline in target proteins. Protein deimination can cause structural and functional protein changes, facilitating protein moonlighting, but also leading to neo-epitope generation and effects on gene regulation. Furthermore, PADs have been found to regulate cellular release of extracellular vesicles (EVs), which are lipid-vesicles released from cells as part of cellular communication. EVs carry protein and genetic cargo and are indicative biomarkers that can be isolated from most body fluids. This study was aimed at profiling deiminated proteins in plasma and EVs of naked mole-rat. Key immune and metabolic proteins were identified to be post-translationally deiminated, with 65 proteins specific for plasma, while 42 proteins were identified to be deiminated in EVs only. Using protein-protein interaction network analysis, deiminated plasma proteins were found to belong to KEEG (Kyoto Encyclopedia of Genes and Genomes) pathways of immunity, infection, cholesterol and drug metabolism, while deiminated proteins in EVs were also linked to KEEG pathways of HIF-1 signalling and glycolysis. The mole-rat EV profiles showed a poly-dispersed population of 50-300 nm, similar to observations of human plasma. Furthermore, the EVs were assessed for three key microRNAs involved in cancer, inflammation and hypoxia. The identification of post-translational deimination of critical immunological and metabolic markers contributes to the current understanding of protein moonlighting functions, via post-translational changes, in the longevity and cancer resistance of naked mole-rats.

Indexed as

AnimalsArginineBiomarkersBlood ProteinsCitrullineExtracellular VesiclesGene Expression RegulationGenomeHumansImmunityLongevityMicroRNAsMole RatsPlasmaProtein-Arginine DeiminasesProtein Interaction MapsArginineBiomarkersBlood ProteinsCitrullineMicroRNAsProtein-Arginine Deiminasesextracellular vesicles (EVs)immunitymetabolismmicroRNA (miR21miR155miR210)naked mole-rat (Heterocephalus glaber)peptidylarginine deiminases (PADs)protein deimination

Identifiers

PMID31671738
PMCPMC6862702
OpenAlexW2981672611

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.