Evidence map›Paper›PMID 31671630›Full record

ReviewProteomes2019

Innovating the Concept and Practice of Two-Dimensional Gel Electrophoresis in the Analysis of Proteomes at the Proteoform Level.

Xianquan Zhan, Biao Li, Xiaohan Zhan, Hartmut Schlüter, Peter R Jungblut, Jens R Coorssen

Abstract readReview
In one paragraph

Review in Proteomes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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  16. Perspectives of Proteomics in Respiratory Allergic Diseases.International journal of molecular sciences · 2023
    Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xianquan ZhanKey Laboratory of Cancer Proteomics of Chinese Ministry of Health, Central South University, 87 Xiangya Road, Changsha 410008, China. yjzhan2011@gmail.com.ORCID 0000-0002-4984-3549
Biao LiKey Laboratory of Cancer Proteomics of Chinese Ministry of Health, Central South University, 87 Xiangya Road, Changsha 410008, China. libiaomo@foxmail.com.
Xiaohan ZhanKey Laboratory of Cancer Proteomics of Chinese Ministry of Health, Central South University, 87 Xiangya Road, Changsha 410008, China. xiaohanzhan@gmail.com.
Hartmut SchlüterInstitute of Clinical Chemistry and Laboratory Medicine, Mass Spectrometric Proteomics, Campus Forschung, N27 Raum 00.008, University Medical Center Hamburg-Eppendorf, Martinistr. 52, 20246 Hamburg, Germany. hschluet@uke.de.ORCID 0000-0002-9358-7036
Peter R JungblutMax Planck Unit for the Science of Pathogens, 10117 Berlin, Germany. jungblut@mpiib-berlin.mpg.de.
Jens R CoorssenDepartments of Health Sciences and Biological Sciences, Faculties of Applied Health Sciences and Mathematics & Science, Brock University, St. Catharines, ON L2S 3A1, Canada. jcoorssen@brocku.ca.ORCID 0000-0001-8048-7370

Funding

the China "863" Plan Project Grant No. 2014AA020610-1 to XZthe Hunan Provincial Hundred Talent Plan To XZthe Hunan Provincial Natural Science Foundation of China Grant No. 14JJ7008 to XZthe National Natural Science Foundation of China Grant No. 81272798 and 81572278 to XZthe Xiangya Hospital Funds for Talent Introduction To XZ
6 · The paper itself

Abstract

Two-dimensional gel electrophoresis (2DE) is an important and well-established technical platform enabling extensive top-down proteomic analysis. However, the long-held but now largely outdated conventional concepts of 2DE have clearly impacted its application to in-depth investigations of proteomes at the level of protein species/proteoforms. It is time to popularize a new concept of 2DE for proteomics. With the development and enrichment of the proteome concept, any given "protein" is now recognized to consist of a series of proteoforms. Thus, it is the proteoform, rather than the canonical protein, that is the basic unit of a proteome, and each proteoform has a specific isoelectric point (p

Indexed as

bottom-up proteomicsisoelectric focusingiTRAQliquid chromatographymass spectrometrypost-translational modificationprotein speciationprotein speciesproteoformSILACsplicingTMTtop-down proteomicstwo-dimensional gel electrophoresis

Identifiers

PMID31671630
PMCPMC6958347

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.