Evidence map›Paper›PMID 31671542›Full record

ArticleInternational journal of molecular sciences2019

Quantitative Phosphoproteomics Reveals System-Wide Phosphorylation Network Altered by Spry in Mouse Mammary Stromal Fibroblasts.

Tiezhu Shi, Linli Yao, Ying Han, Piliang Hao, Pengfei Lu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tiezhu ShiSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. shitzh@shanghaitech.edu.cn.
Linli YaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. yll0123456@126.com.
Ying HanSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. hanying@shanghaitech.edu.cn.
Piliang HaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. haopl@shanghaitech.edu.cn.
Pengfei LuSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. lvpf@shanghaitech.edu.cn.
ShanghaiTech University · CNUniversity of Chinese Academy of Sciences · CN

Funding

Ministry of Science and Technology of P.R. China 2017YFA0103502National Natural Science Foundation of China 31671494Startup fund from ShanghaiTech University To Pengfei Lu
6 · The paper itself

Abstract

Understanding the fundamental role of the stroma in normal development and cancer progression has been an emerging focus in recent years. The receptor tyrosine kinase (RTK) signaling pathway has been reported playing critical roles in regulating the normal and cancer microenvironment, but the underlying mechanism is still not very clear. By applying the quantitative phosphoproteomic analysis of Sprouty proteins (SPRYs), generic modulators of RTK signaling and deleted mouse mammary fibroblasts, we quantified a total of 11,215 unique phosphorylation sites. By contrast, 554 phosphorylation sites on 425 proteins had SPRY-responsive perturbations. Of these, 554 phosphosites, 362 sites on 277 proteins, were significantly increased, whereas 192 sites on 167 proteins were decreased. Among the regulated proteins, we identified 31 kinases, 7 phosphatases, and one phosphatase inhibitor that were not systematically characterized before. Furthermore, we reconstructed a phosphorylation network centered on RTK signaling regulated by SPRY. Collectively, this study uncovered a system-wide phosphorylation network regulated by SPRY, providing an additional insight into the complicated RTK signaling pathways involved in the mammary gland microenvironment.

Indexed as

AnimalsChromatography, LiquidFemaleFibroblastsMammary Glands, AnimalMembrane ProteinsMicePhosphoproteinsProtein Interaction MapsProteomicsSignal TransductionTandem Mass SpectrometryMembrane ProteinsPhosphoproteinsmammary stromal microenvironmentquantitative phosphoproteomicsreceptor tyrosine kinase signaling pathwaysprouty

Identifiers

PMID31671542
PMCPMC6862705
OpenAlexW2982461341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.