Evidence map›Paper›PMID 31668704›Full record

ArticleAmerican journal of human genetics2019

The Human-Specific BOLA2 Duplication Modifies Iron Homeostasis and Anemia Predisposition in Chromosome 16p11.2 Autism Individuals.

Giuliana Giannuzzi, Paul J Schmidt, Eleonora Porcu, Gilles Willemin, Katherine M Munson, Xander Nuttle, Rachel Earl, Jacqueline Chrast, Kendra Hoekzema, Davide Risso and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Article
  3. The pleiotropic spectrum of proximal 16p11.2 CNVs.American journal of human genetics · 2024
    Review
  4. Genome research · 2024
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Integrative analysis of the role ofFrontiers in genetics · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Epigenetic patterns in a complete human genome.Science (New York, N.Y.) · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 8 institutions in 4 countries.

Giuliana GiannuzziCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland. Electronic address: giuliana.giannuzzi@gmail.com.
Paul J SchmidtDepartment of Pathology, Boston Children's Hospital, Boston, MA 02115, USA.
Eleonora PorcuCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland; Swiss Institute of Bioinformatics, Lausanne, 1015, Switzerland.
Gilles WilleminCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland.
Katherine M MunsonDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Xander NuttleDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Rachel EarlDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA 98195, USA.
Jacqueline ChrastCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland.
Kendra HoekzemaDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Davide RissoDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Katrin MännikCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland.
Pasquelena De NittisCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland.
Ethan D BaratzGenetics and Metabolism Section, Liver Diseases Branch, NIDDK, National Institutes of Health, Bethesda, MD 20892, USA.
16p11.2 Consortium
Yann HeraultUniversity of Strasbourg, CNRS, INSERM, PHENOMIN-ICS, Institute of Genetics and Molecular and Cellular Biology, Illkirch, 67404, France.
Xiang GaoModel Animal Research Center, Collaborative Innovation Center for Genetics and Development, Nanjing Biomedical Research Institute, Nanjing University, Nanjing, 210061 China.
Caroline C PhilpottGenetics and Metabolism Section, Liver Diseases Branch, NIDDK, National Institutes of Health, Bethesda, MD 20892, USA.
Raphael A BernierDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, WA 98195, USA.
Zoltan KutalikSwiss Institute of Bioinformatics, Lausanne, 1015, Switzerland; University Center for Primary Care and Public Health, Lausanne, 1010, Switzerland.
Mark D FlemingDepartment of Pathology, Boston Children's Hospital, Boston, MA 02115, USA.
Evan E EichlerDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.
Alexandre ReymondCenter for Integrative Genomics, University of Lausanne, Lausanne, 1015, Switzerland.
University of Washington · USUniversity of Lausanne · CHBoston Children's Hospital · USSIB Swiss Institute of Bioinformatics · CHInserm · FRNanjing University · CNNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · US

Funding

Sequence and Assembly of Segmental DuplicationsR01HG002385 · NHGRI · UNIVERSITY OF WASHINGTON · PI Evan Eichler · 2001 to 2026
$13.3M
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NHGRI NIH HHS R01 HG002385
6 · The paper itself

Abstract

Human-specific duplications at chromosome 16p11.2 mediate recurrent pathogenic 600 kbp BP4-BP5 copy-number variations, which are among the most common genetic causes of autism. These copy-number polymorphic duplications are under positive selection and include three to eight copies of BOLA2, a gene involved in the maturation of cytosolic iron-sulfur proteins. To investigate the potential advantage provided by the rapid expansion of BOLA2, we assessed hematological traits and anemia prevalence in 379,385 controls and individuals who have lost or gained copies of BOLA2: 89 chromosome 16p11.2 BP4-BP5 deletion carriers and 56 reciprocal duplication carriers in the UK Biobank. We found that the 16p11.2 deletion is associated with anemia (18/89 carriers, 20%, p = 4e-7, OR = 5), particularly iron-deficiency anemia. We observed similar enrichments in two clinical 16p11.2 deletion cohorts, which included 6/63 (10%) and 7/20 (35%) unrelated individuals with anemia, microcytosis, low serum iron, or low blood hemoglobin. Upon stratification by BOLA2 copy number, our data showed an association between low BOLA2 dosage and the above phenotypes (8/15 individuals with three copies, 53%, p = 1e-4). In parallel, we analyzed hematological traits in mice carrying the 16p11.2 orthologous deletion or duplication, as well as Bola2

Indexed as

AnemiaAnimalsAutistic DisorderChromosome DeletionChromosome DisordersChromosome DuplicationChromosomes, Human, Pair 16DNA Copy Number VariationsFemaleGenotypeHeterozygoteHomeostasisHumansIronMalePhenotypeBOLA2 protein, humanIronProteins16p11.2 copy number variantsBOLA2gene duplicationhuman evolutionhuman-specific segmental duplicationsiron deficiency anemia

Identifiers

PMID31668704
PMCPMC6849090
OpenAlexW2982194238

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.