Evidence map›Paper›PMID 31667592›Full record

ArticleHuman genetics2019

First genome-wide association study of non-severe malaria in two birth cohorts in Benin.

Jacqueline Milet, Anne Boland, Pierre Luisi, Audrey Sabbagh, Ibrahim Sadissou, Paulin Sonon, Nadia Domingo, Friso Palstra, Laure Gineau, David Courtin and 4 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Human genetic variations conferring resistance to malaria.Journal of translational medicine · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Forward Genetics in Apicomplexa Biology: The Host Side of the Story.Frontiers in cellular and infection microbiology · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Jacqueline MiletUniversité de Paris, MERIT, IRD, F-75006, Paris, France. jacqueline.milet@ird.fr.ORCID http://orcid.org/0000-0003-2710-1517
Anne BolandCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, CEA, Université Paris-Saclay, 91057, Evry, France.
Pierre LuisiCentro de Investigación y Desarrollo en Inmunología y Enfermedades Infecciosas, Consejo Nacional de Investigaciones Científicas y Técnicas, Córdoba, Argentina.
Audrey SabbaghUniversité de Paris, MERIT, IRD, F-75006, Paris, France.
Ibrahim SadissouFaculty of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Paulin SononFaculty of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID http://orcid.org/0000-0002-7729-4719
Nadia DomingoCentre d'Etude et de Recherche sur le Paludisme Associé à la Grossesse et l'Enfance, Faculté des Sciences de la Santé, Cotonou, Benin.
Friso PalstraUniversité de Paris, MERIT, IRD, F-75006, Paris, France.
Laure GineauUniversité de Paris, MERIT, IRD, F-75006, Paris, France.
David CourtinUniversité de Paris, MERIT, IRD, F-75006, Paris, France.
Achille MassougbodjiCentre d'Etude et de Recherche sur le Paludisme Associé à la Grossesse et l'Enfance, Faculté des Sciences de la Santé, Cotonou, Benin.
André GarciaUniversité de Paris, MERIT, IRD, F-75006, Paris, France.
Jean-François DeleuzeCentre National de Recherche en Génomique Humaine (CNRGH), Institut de Biologie François Jacob, CEA, Université Paris-Saclay, 91057, Evry, France.
Hervé PerdryUniversité Paris-Saclay, Centre de recherche en Epidémiologie et Santé des Populations, Institut National de la Santé et de la Recherche Médicale, Villejuif, France.ORCID http://orcid.org/0000-0001-7570-1678
Université Paris Cité · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversidade de São Paulo · BRConsejo Nacional de Investigaciones Científicas y Técnicas · ARInserm · FR

Funding

Agence Nationale de la Recherche PRSP 2010 012-001Agence Nationale de la Recherche SEST 2006 040-01Ministère de la Recherche et des Technologies (FR) REFS Nu2006-22
6 · The paper itself

Abstract

Recent research efforts to identify genes involved in malaria susceptibility using genome-wide approaches have focused on severe malaria. Here, we present the first GWAS on non-severe malaria designed to identify genetic variants involved in innate immunity or innate resistance mechanisms. Our study was performed on two cohorts of infants from southern Benin (525 and 250 individuals used as discovery and replication cohorts, respectively) closely followed from birth to 18-24 months of age, with an assessment of a space- and time-dependent environmental risk of exposure. Both the recurrence of mild malaria attacks and the recurrence of malaria infections as a whole (symptomatic and asymptomatic) were considered. Post-GWAS functional analyses were performed using positional, eQTL, and chromatin interaction mapping to identify the genes underlying association signals. Our study highlights a role of PTPRT, a tyrosine phosphatase receptor involved in STAT3 pathway, in the protection against both mild malaria attacks and malaria infections (p = 9.70 × 10

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyQuantitative Trait LociBeninCarrier ProteinsChild, PreschoolCohort StudiesFemaleGenotypeHumansInfantInfant, NewbornMalariaMaleCarrier Proteins

Identifiers

PMID31667592
OpenAlexW2982488774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.