Evidence map›Paper›PMID 31666587›Full record

ArticleScientific reports2019

8-OxoG in GC-rich Sp1 binding sites enhances gene transcription in adipose tissue of juvenile mice.

Jong Woo Park, Young In Han, Sung Woo Kim, Tae Min Kim, Su Cheong Yeom, Jaeku Kang, Joonghoon Park

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. 8-Oxoguanine: A Lesion, an Epigenetic Mark, or a Molecular Signal?International journal of molecular sciences · 2025
    Review
  4. Article
  5. Article
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  7. Article
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  12. Article
  13. The genomics of oxidative DNA damage, repair, and resulting mutagenesis.Computational and structural biotechnology journal · 2020
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Jong Woo ParkResearch Center for Epigenome Regulation, School of Pharmacy, Sungkyunkwan University, Suwon, 16419, Republic of Korea.
Young In HanInstitute of Green Bio Science and Technology, Seoul National University, Pyeongchang, 25354, Republic of Korea.
Sung Woo KimAnimal Genetic Resources Research Center, National Institute of Animal Science, Rural Development Administration (RDA), Namwon, 55717, Republic of Korea.
Tae Min KimInstitute of Green Bio Science and Technology, Seoul National University, Pyeongchang, 25354, Republic of Korea.
Su Cheong YeomInstitute of Green Bio Science and Technology, Seoul National University, Pyeongchang, 25354, Republic of Korea.ORCID http://orcid.org/0000-0002-9491-5740
Jaeku KangDepartment of Pharmacology, College of Medicine, Konyang University, Daejeon, 35365, Republic of Korea. jaeku@konyang.ac.kr.
Joonghoon ParkInstitute of Green Bio Science and Technology, Seoul National University, Pyeongchang, 25354, Republic of Korea. joonghoon@snu.ac.kr.
Seoul National University · KRKonyang University · KRNational University College · PRRural Development Administration · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oxidation of guanine to 8-oxoguanine (8-oxoG) is the most common type of oxidative DNA lesion. There is a growing body of evidence indicating that 8-oxoG is not only pre-mutagenic, but also plays an essential role in modulating gene expression along with its cognate repair proteins. In this study, we investigated the relationship between 8-oxoG formed under intrinsic oxidative stress conditions and gene expression in adipose and lung tissues of juvenile mice. We observed that transcriptional activity and the number of active genes were significantly correlated with the distribution of 8-oxoG in gene promoter regions, as determined by reverse-phase liquid chromatography/mass spectrometry (RP-LC/MS), and 8-oxoG and RNA sequencing. Gene regulation by 8-oxoG was not associated with the degree of 8-oxoG formation. Instead, genes with GC-rich transcription factor binding sites in their promoters became more active with increasing 8-oxoG abundance as also demonstrated by specificity protein 1 (Sp1)- and estrogen response element (ERE)-luciferase assays in human embryonic kidney (HEK293T) cells. These results indicate that the occurrence of 8-oxoG in GC-rich Sp1 binding sites is important for gene regulation during adipose tissue development.

Indexed as

GC Rich SequenceTranscription, GeneticAdipose TissueAnimalsBase SequenceBinding SitesGenomicsGuanineHEK293 CellsHumansMiceNucleotide MotifsSp1 Transcription Factor8-hydroxyguanineGuanineSp1 Transcription Factor

Identifiers

PMID31666587
PMCPMC6821754
OpenAlexW2982323437

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.