Evidence map›Paper›PMID 31665539›Full record

ArticleMolecular microbiology2020

Second messengers and divergent HD-GYP phosphodiesterases regulate 3',3'-cGAMP signaling.

Todd A Wright, Lucy Jiang, James J Park, Wyatt A Anderson, Ge Chen, Zachary F Hallberg, Beiyan Nan, Ming C Hammond

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Milestones in the development ofJournal of bacteriology · 2025
    Review
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  8. Biochemistry · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Todd A WrightDepartment of Chemistry, University of California, Berkeley, CA, 94720, USA.
Lucy JiangDepartment of Chemistry, University of California, Berkeley, CA, 94720, USA.
James J ParkDepartment of Chemistry, University of California, Berkeley, CA, 94720, USA.
Wyatt A AndersonDepartment of Chemistry, University of California, Berkeley, CA, 94720, USA.
Ge ChenDepartment of Biology, Texas A&M University, College Station, TX, 77843, USA.
Zachary F HallbergDepartment of Chemistry, University of California, Berkeley, CA, 94720, USA.
Beiyan NanDepartment of Biology, Texas A&M University, College Station, TX, 77843, USA.
Ming C HammondDepartment of Chemistry and Henry Eyring Center for Cell and Genome Science, University of Utah, Salt Lake City, UT, 84112, USA.
University of California, Berkeley · USUniversity of Utah · USTexas A&M University · US

Funding

Enabling High-Throughput Analysis and Single-Cell Imaging of Bacterial SignalsR01GM124589 · NIGMS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI HAMMOND, MING CHEN · 2017 to 2025
$2.8M
The Origin of Rod Shape in BacteriaR01GM129000 · NIGMS · TEXAS A&M UNIVERSITY · PI NAN, BEIYAN · 2018 to 2022
$1.6M
NIGMS NIH HHS R01 GM124589NIGMS NIH HHS R01 GM129000
6 · The paper itself

Abstract

3',3'-cyclic GMP-AMP (cGAMP) is the third cyclic dinucleotide (CDN) to be discovered in bacteria. No activators of cGAMP signaling have yet been identified, and the signaling pathways for cGAMP have been inferred to display a narrow distribution based upon the characterized synthases, DncV and Hypr GGDEFs. Here, we report that the ubiquitous second messenger cyclic AMP (cAMP) is an activator of the Hypr GGDEF enzyme GacB from Myxococcus xanthus. Furthermore, we show that GacB is inhibited directly by cyclic di-GMP, which provides evidence for cross-regulation between different CDN pathways. Finally, we reveal that the HD-GYP enzyme PmxA is a cGAMP-specific phosphodiesterase (GAP) that promotes resistance to osmotic stress in M. xanthus. A signature amino acid change in PmxA was found to reprogram substrate specificity and was applied to predict the presence of non-canonical HD-GYP phosphodiesterases in many bacterial species, including phyla previously not known to utilize cGAMP signaling.

Indexed as

Bacterial ProteinsMyxococcus xanthusNucleotides, CyclicPhosphoric Diester HydrolasesBacterial Proteinscyclic guanosine monophosphate-adenosine monophosphateNucleotides, CyclicPhosphoric Diester Hydrolases

Identifiers

PMID31665539
PMCPMC7209772
OpenAlexW2982552522

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.