Evidence map›Paper›PMID 31665373›Full record

ArticleThe Journal of infectious diseases2020

Spread of Antigenically Drifted Influenza A(H3N2) Viruses and Vaccine Effectiveness in the United States During the 2018-2019 Season.

Brendan Flannery, Rebecca J Garten Kondor, Jessie R Chung, Manjusha Gaglani, Michael Reis, Richard K Zimmerman, Mary Patricia Nowalk, Michael L Jackson, Lisa A Jackson, Arnold S Monto and 13 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 125 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
125citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

125 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  7. Observational
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  11. Assessing CD8Clinical & translational immunology · 2026
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65 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors.

Brendan FlanneryInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Rebecca J Garten KondorInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Jessie R ChungInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Manjusha GaglaniBaylor Scott & White Health, Texas A&M University College of Medicine, Temple, Texas.
Michael ReisBaylor Scott & White Health, Texas A&M University College of Medicine, Temple, Texas.
Richard K ZimmermanUniversity of Pittsburgh Schools of Health Sciences and University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.
Mary Patricia NowalkUniversity of Pittsburgh Schools of Health Sciences and University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania.
Michael L JacksonKaiser Permanente Washington Health Research Institute, Seattle, Washington.
Lisa A JacksonKaiser Permanente Washington Health Research Institute, Seattle, Washington.
Arnold S MontoUniversity of Michigan School of Public Health, Ann Arbor, Michigan.
Emily T MartinUniversity of Michigan School of Public Health, Ann Arbor, Michigan.
Edward A BelongiaMarshfield Clinic Research Institute, Marshfield, Wisconsin.
Huong Q McLeanMarshfield Clinic Research Institute, Marshfield, Wisconsin.
Sara S KimOak Ridge Institute for Science and Education Fellowship Program, Oak Ridge, Tennessee.
Lenee BlantonInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Krista KnissInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Alicia P BuddInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Lynnette BrammerInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Thomas J StarkInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
John R BarnesInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
David E WentworthInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Alicia M FryInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.
Manish PatelInfluenza Division, Centers for Disease Control and Prevention, Atlanta, Georgia.

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR001857 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2016 to 2025
$129.3M
US Influenza Vaccine Effectiveness NetworkU01IP001034 · IP · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MONTO, ARNOLD S · 2016 to 2020
$10.0M
Annual Estimates of Influenza Vaccine Effectiveness and Evaluation of Immune Response in a Wisconsin PopulationU01IP001038 · IP · MARSHFIELD CLINIC RESEARCH FOUNDATION · PI BELONGIA, EDWARD · 2016 to 2020
$8.0M
Prospective annual estimates of influenza vaccine effectiveness and burden of diseaseU01IP001037 · IP · KAISER FOUNDATION RESEARCH INSTITUTE · PI JACKSON, MICHAEL L · 2016 to 2020
$7.8M
Outpatient VE for seasonal flu, pandemic flu and RSV in a large, diverse networkU01IP001035 · IP · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZIMMERMAN, RICHARD K · 2016 to 2020
$7.8M
Mandatory_Estimates of Vaccine Effectiveness Against Medically-Attended, PCR-Confirmed Influenza in West South Central U.S.U01IP001039 · IP · SCOTT AND WHITE MEMORIAL HOSPITAL · PI GAGLANI, MANJUSHA · 2016 to 2020
$6.5M
NCATS NIH HHS UL1 TR001857NCIRD CDC HHS U01 IP001034NCIRD CDC HHS U01 IP001035NCIRD CDC HHS U01 IP001037NCIRD CDC HHS U01 IP001038NCIRD CDC HHS U01 IP001039
6 · The paper itself

Abstract

backgroundIncreased illness due to antigenically drifted A(H3N2) clade 3C.3a influenza viruses prompted concerns about vaccine effectiveness (VE) and vaccine strain selection. We used US virologic surveillance and US Influenza Vaccine Effectiveness (Flu VE) Network data to evaluate consequences of this clade.

methodsDistribution of influenza viruses was described using virologic surveillance data. The Flu VE Network enrolled ambulatory care patients aged ≥6 months with acute respiratory illness at 5 sites. Respiratory specimens were tested for influenza by means of reverse-transcriptase polymerase chain reaction and were sequenced. Using a test-negative design, we estimated VE, comparing the odds of influenza among vaccinated versus unvaccinated participants.

resultsDuring the 2018-2019 influenza season, A(H3N2) clade 3C.3a viruses caused an increasing proportion of influenza cases. Among 2763 Flu VE Network case patients, 1325 (48%) were infected with A(H1N1)pdm09 and 1350 (49%) with A(H3N2); clade 3C.3a accounted for 977 (93%) of 1054 sequenced A(H3N2) viruses. VE was 44% (95% confidence interval, 37%-51%) against A(H1N1)pdm09 and 9% (-4% to 20%) against A(H3N2); VE was 5% (-10% to 19%) against A(H3N2) clade 3C.3a viruses.

conclusionsThe predominance of A(H3N2) clade 3C.3a viruses during the latter part of the 2018-2019 season was associated with decreased VE, supporting the A(H3N2) vaccine component update for 2019-2020 northern hemisphere influenza vaccines.

Indexed as

Antigenic VariationInfluenza A Virus, H1N1 SubtypeInfluenza VaccinesAdolescentAdultAgedChildChild, PreschoolFemaleHumansInfantInfluenza A Virus, H3N2 SubtypeInfluenza, HumanMaleMiddle AgedNoseInfluenza VaccinesRNA, Viralinfluenzainfluenza vaccinevaccine effectiveness

Identifiers

PMID31665373
PMCPMC7325528

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.