ArticleGenome biology and evolution2020
The Mitochondrial Genome of Eleusine indica and Characterization of Gene Content within Poaceae.
Article in Genome biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 19 citations in OpenAlex.
- Phased-genome assemblies of saltgrass reveal structural dynamics and genomic basis for extreme salt tolerance and dioecy.Plant communications · 2026Article
- The complete mitochondrial genome and phylogenetic analysis ofFrontiers in plant science · 2026Article
- Phylogenomics of angiosperms based on mitochondrial genes: insights into deep node relationships.BMC biology · 2025Article
- Mitochondrial Genome Insights into Evolution and Gene Regulation inInternational journal of molecular sciences · 2025Article
- Assembly and comparative analysis of the complete mitochondrial genome ofFrontiers in plant science · 2025Article
- Review
- Elucidating the multichromosomal structure within the Brasenia schreberi mitochondrial genome through assembly and analysis.BMC genomics · 2024Article
- Complete mitochondrial genome assembly ofFrontiers in plant science · 2024Article
- Assembly and comparative genome analysis of four mitochondrial genomes fromFrontiers in plant science · 2024Article
- The mitochondrial genome of the diploid oat Avena longiglumis.BMC plant biology · 2023Article
- Article
- Both Conifer II and Gnetales are characterized by a high frequency of ancient mitochondrial gene transfer to the nuclear genome.BMC biology · 2021Article
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant mitochondrial (mt) genome assembly provides baseline data on size, structure, and gene content, but resolving the sequence of these large and complex organelle genomes remains challenging due to fragmentation, frequent recombination, and transfers of DNA from neighboring plastids. The mt genome for Eleusine indica (Poaceae: goosegrass) is comprehensibly analyzed here, providing key reference data for an economically significant invasive species that is also the maternal parent of the allotetraploid crop Finger millet (Eleusine coracana). The assembled E. indica genome contains 33 protein coding genes, 6 rRNA subunits, 24 tRNA, 8 large repetitive regions 15 kb of transposable elements across a total of 520,691 bp. Evidence of RNA editing and loss of rpl2, rpl5, rps14, rps11, sdh4, and sdh3 genes is evaluated in the context of an updated survey of mt genomic gene content across the grasses through an analysis of publicly available data. Hypothesized patterns of Poaceae mt gene loss are examined in a phylogenetic context to clarify timing, showing that rpl2 was transferred to the nucleus from the mitochondrion prior to the origin of the PACMAD clade.
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