Evidence map›Paper›PMID 31664897›Full record

ArticleBMC plant biology2019

Functional analysis of GhCHS, GhANR and GhLAR in colored fiber formation of Gossypium hirsutum L.

Jianfang Gao, Li Shen, Jingli Yuan, Hongli Zheng, Quansheng Su, Weiguang Yang, Liqing Zhang, Vitalis Ekene Nnaemeka, Jie Sun, Liping Ke and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 50 citations in OpenAlex.

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  10. Review
  11. Naturally colored cotton for wearable applications.Frontiers in plant science · 2024
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Identification and functional analysis of a pollen fertility-associated gene GhGLP4 of Gossypium hirsutum L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jianfang GaoPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Li ShenPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Jingli YuanPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Hongli ZhengPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Quansheng SuPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Weiguang YangPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Liqing ZhangPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Vitalis Ekene NnaemekaPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China.
Jie SunCollege of Agriculture/The Key Laboratory of Oasis Eco-Agriculture, Shihezi University, Shihezi 832000, Xinjiang, China.
Liping KePlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China. keliping@zstu.edu.cn.
Yuqiang SunPlant Genomics & Molecular Improvement of Colored Fiber Lab, Key Laboratory of Plant Secondary Metabolism and Regulation of Zhejiang Province, College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310016, Zhejiang, China. sunyuqiang@zstu.edu.cn.ORCID http://orcid.org/0000-0002-9178-2487
Zhejiang Sci-Tech University · CNShihezi University · CN

Funding

General Program of National Natural Science Foundation of China 31671738The National Key Research and Development Program of China 2018YFD0100401
6 · The paper itself

Abstract

backgroundThe formation of natural colored fibers mainly results from the accumulation of different anthocyanidins and their derivatives in the fibers of Gossypium hirsutum L. Chalcone synthase (CHS) is the first committed enzyme of flavonoid biosynthesis, and anthocyanidins are transported into fiber cells after biosynthesis mainly by Anthocyanidin reductase (ANR) and Leucoanthocyanidin reductase (LAR) to present diverse colors with distinct stability. The biochemical and molecular mechanism of pigment formation in natural colored cotton fiber is not clear.

resultsThe three key genes of GhCHS, GhANR and GhLAR were predominantly expressed in the developing fibers of colored cotton. In the GhCHSi, GhANRi and GhLARi transgenic cottons, the expression levels of GhCHS, GhANR and GhLAR significantly decreased in the developing cotton fiber, negatively correlated with the content of anthocyanidins and the color depth of cotton fiber. In colored cotton Zongxu1 (ZX1) and the GhCHSi, GhANRi and GhLARi transgenic lines of ZX1, HZ and ZH, the anthocyanidin contents of the leaves, cotton kernels, the mixture of fiber and seedcoat were all changed and positively correlated with the fiber color.

conclusionThe three genes of GhCHS, GhANR and GhLAR were predominantly expressed early in developing colored cotton fibers and identified to be a key genes of cotton fiber color formation. The expression levels of the three genes affected the anthocyanidin contents and fiber color depth. So the three genes played a crucial part in cotton fiber color formation and has important significant to improve natural colored cotton quality and create new colored cotton germplasm resources by genetic engineering.

Indexed as

Cotton FiberAcyltransferasesAmino Acid SequenceAnthocyaninsBiological TransportColorGossypiumPlant ProteinsSequence AlignmentAcyltransferasesAnthocyaninsflavanone synthetasePlant ProteinsAnthocyanidinFiber colorGhANRGhCHSG. hirsutum L.GhLAR

Identifiers

PMID31664897
PMCPMC6819470
OpenAlexW2982709039

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.