Evidence map›Paper›PMID 31664150›Full record

ArticleScientific reports2019

Yeast two-hybrid screening for proteins that interact with PFT in wheat.

Yi He, Lei Wu, Xiang Liu, Xu Zhang, Peng Jiang, Hongxiang Ma

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yi HeInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China.
Lei WuInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China.
Xiang LiuTibet Agriculture and Animal Husbandry University, Linzhi, China.
Xu ZhangInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China.
Peng JiangInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China.
Hongxiang MaInstitute of Food Crops, Jiangsu Academy of Agricultural Sciences/Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing, China. hongxiangma@163.com.
Jiangsu Academy of Agricultural Sciences · CNTibet University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fusarium head blight (FHB) is a devastating disease of wheat worldwide. Fhb1 is the most consistently reported quantitative trait locus (QTL) for FHB resistance breeding. A pore-forming toxin-like (PFT) gene at Fhb1 was first cloned by map-based cloning and found to confer FHB resistance in wheat. Proteins often interact with each other to execute their functions. Characterization of the proteins interacting with PFT might therefore provide information on the molecular mechanisms of PFT functions. In this study, a high-quality yeast two-hybrid (Y2H) library using RNA extracted from Fusarium graminearum (Fg)-infected wheat spikes of Sumai 3 was constructed. The agglutinin domains of PFT exhibited no self-activation and toxicity to yeast cells and were used as bait to screen the Y2H library. Twenty-three proteins that interact with PFT were obtained, which were mainly involved in the ubiquitination process, clathrin coat assembly, the oxidation-reduction process, and protein phosphorylation. The expression pattern of these interacting genes was analyzed by quantitative real-time PCR. This study clarifies the protein interactions of PFT and raises a regulatory network for PFT regarding FHB resistance in wheat.

Indexed as

Fungal ProteinsFusariumGene Expression Regulation, FungalPore Forming Cytotoxic ProteinsTwo-Hybrid System TechniquesPlant DiseasesTriticumFungal ProteinsPore Forming Cytotoxic Proteins

Identifiers

PMID31664150
PMCPMC6820867
OpenAlexW2982511821

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.