Evidence map›Paper›PMID 31662705›Full record

ArticleJournal of biomolecular techniques : JBT2019

Top-Down ETD-MS Provides Unreliable Quantitation of Methionine Oxidation.

Surendar Tadi, Joshua S Sharp

Open access · diamondAbstract read
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Surendar TadiDepartment of Biomolecular Sciences, University of Mississippi, Oxford, Mississippi, 38677, USA.
Joshua S SharpDepartment of Biomolecular Sciences, University of Mississippi, Oxford, Mississippi, 38677, USA.
University of Mississippi · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methionine oxidation plays a critical role in many processes of biologic and biomedical importance, including cellular redox responses and stability of protein pharmaceuticals. Bottom-up methods for analysis of methionine oxidation can suffer from incomplete sequence coverage, as well as an inability to readily detect correlated oxidation between 2 or more methionines. However, the methodology for quantifying protein oxidation in top-down analyses is lacking. Previous work has shown that electron transfer dissociation (ETD)-based tandem mass spectrometry (MS/MS) fragmentation offers accurate and precise quantification of amino acid oxidation in peptides, even in complex samples. However, the ability of ETD-based MS/MS fragmentation to accurately quantify amino acid oxidation of proteins in a top-down manner has not been reported. Using apomyoglobin and calmodulin as model proteins, we partially converted methionines into methionine sulfoxide by incubation in H

Indexed as

ApoproteinsCalmodulinHydrogen PeroxideHydroxyl RadicalMethionineMyoglobinOxidation-ReductionPeptidesProtein FootprintingProtein Processing, Post-TranslationalProteinsReproducibility of ResultsTandem Mass SpectrometryapomyoglobinApoproteinsCalmodulinHydrogen PeroxideHydroxyl RadicalMethionineMyoglobinPeptidesProteinshydroxyl radical protein footprintingpost-translational modificationproteomics

Identifiers

PMID31662705
PMCPMC6808186
OpenAlexW2985497536

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.