Evidence map›Paper›PMID 31662474›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

A MYC2/MYC3/MYC4-dependent transcription factor network regulates water spray-responsive gene expression and jasmonate levels.

Alex Van Moerkercke, Owen Duncan, Mark Zander, Jan Šimura, Martyna Broda, Robin Vanden Bossche, Mathew G Lewsey, Sbatie Lama, Karam B Singh, Karin Ljung and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
20.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 160 citations in OpenAlex.

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  17. Expression responses ofPlant signaling & behavior · 2024
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7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Alex Van MoerkerckeLund University Plant Sciences, Department of Biology, Lund University, 223 62 Lund, Sweden.
Owen DuncanAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA 6009, Australia.
Mark ZanderGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037.
Jan ŠimuraUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Martyna BrodaAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA 6009, Australia.ORCID 0000-0003-0591-7814
Robin Vanden BosscheDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Mathew G LewseyDepartment of Animal, Plant, and Soil Science, School of Life Science, La Trobe University, Bundoora, VIC 3086, Australia.ORCID 0000-0002-2631-4337
Sbatie LamaLund University Plant Sciences, Department of Biology, Lund University, 223 62 Lund, Sweden.
Karam B SinghAgriculture and Food, Commonwealth Scientific and Industrial Research Organisation, Floreat, WA 6913, Australia.
Karin LjungUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0003-2901-189X
Joseph R EckerGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037.
Alain GoossensDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.ORCID 0000-0002-1599-551X
A Harvey MillarAustralian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, Perth, WA 6009, Australia.
Olivier Van AkenLund University Plant Sciences, Department of Biology, Lund University, 223 62 Lund, Sweden; olivier.van_aken@biol.lu.se.ORCID 0000-0003-4024-968X
Australian Research Council · AULund University · SESalk Institute for Biological Studies · USSwedish University of Agricultural Sciences · SEVlaams Instituut voor Biotechnologie · BECommonwealth Scientific and Industrial Research Organisation · AU

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Mechanical stimuli, such as wind, rain, and touch affect plant development, growth, pest resistance, and ultimately reproductive success. Using water spray to simulate rain, we demonstrate that jasmonic acid (JA) signaling plays a key role in early gene-expression changes, well before it leads to developmental changes in flowering and plant architecture. The JA-activated transcription factors MYC2/MYC3/MYC4 modulate transiently induced expression of 266 genes, most of which peak within 30 min, and control 52% of genes induced >100-fold. Chromatin immunoprecipitation-sequencing analysis indicates that MYC2 dynamically binds >1,300 promoters and

Indexed as

Gene Expression Regulation, PlantMechanotransduction, CellularArabidopsisArabidopsis ProteinsCyclopentanesGene Regulatory NetworksOxylipinsProteomeRainTranscription FactorsArabidopsis ProteinsCyclopentanesjasmonic acidOxylipinsProteomeTranscription Factorsjasmonic acidmechanical stimulationplantstouchtranscription

Identifiers

PMID31662474
PMCPMC6859355
OpenAlexW2982701454

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.