Evidence map›Paper›PMID 31661835›Full record

ArticleInternational journal of molecular sciences2019

Genome-Wide Analysis of Cotton miRNAs During Whitefly Infestation Offers New Insights into Plant-Herbivore Interaction.

Jianying Li, J Joe Hull, Sijia Liang, Qiongqiong Wang, Luo Chen, Qinghua Zhang, Maojun Wang, Shahid Mansoor, Xianlong Zhang, Shuangxia Jin

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 50 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Jianying LiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. lijy90@126.com.ORCID 0000-0002-9825-672X
J Joe HullUSDA-ARS, Arid Land Agricultural Research Center, 21881 North Cardon Lane, Maricopa, AZ 85138, USA. joe.hull@ars.usda.gov.
Sijia LiangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. sijialiang@webmail.hzau.edu.cn.
Qiongqiong WangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. wangqq0515@163.com.
Luo ChenNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. chenluo@webmail.hzau.edu.cn.
Qinghua ZhangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. qhzhang@outlook.com.
Maojun WangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. mjwang@mail.hzau.edu.cn.
Shahid MansoorNational Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad 38000, Pakistan. shahidmansoor7@gmail.com.
Xianlong ZhangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. xlzhang@mail.hzau.edu.cn.
Shuangxia JinNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China. jsx@mail.hzau.edu.cn.ORCID 0000-0002-1495-9154
Huazhong Agricultural University · CNNational Institute for Biotechnology and Genetic Engineering · PKU.S. Arid Land Agricultural Research Center · US

Funding

National Natural Science Foundation of China C130406National R&D Project of Transgenic Crops of Ministry of Science and Technology of China 2016ZX08010001-006
6 · The paper itself

Abstract

Although the regulatory function of miRNAs and their targets have been characterized in model plants, a possible underlying role in the cotton response to herbivore infestation has not been determined. To investigate this, we performed small RNA and degradome sequencing between resistant and susceptible cotton cultivar following infestation with the generalist herbivore whitefly. In total, the 260 miRNA families and 241 targets were identified. Quantitative-PCR analysis revealed that several miRNAs and their corresponding targets exhibited dynamic spatio-temporal expression patterns. Moreover, 17 miRNA precursors were generated from 29 long intergenic non-coding RNA (lincRNA) transcripts. The genome-wide analysis also led to the identification of 85 phased small interfering RNA (phasiRNA) loci. Among these, nine

Indexed as

HemipteraHerbivoryAnimalsCyclopentanesDisease ResistanceGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGene SilencingGossypiumIndoleacetic AcidsIsoleucineMicroRNAsPlant ProteinsRNA, Long NoncodingRNA, PlantCyclopentanesIndoleacetic AcidsIsoleucinejasmonoyl-isoleucineMicroRNAsPlant ProteinsRNA, Long NoncodingRNA, PlantRNA, Small Interferingcottoninsect resistancelincRNAmiRNAphasiRNAwhitefly

Identifiers

PMID31661835
PMCPMC6861988
OpenAlexW2970528888

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.