Evidence map›Paper›PMID 31660728›Full record

ArticleAnalytical chemistry2019

Quantitative Imaging of Proteins in Tissue by Stable Isotope Labeled Mimetic Liquid Extraction Surface Analysis Mass Spectrometry.

Jana Havlikova, Elizabeth C Randall, Rian L Griffiths, John G Swales, Richard J A Goodwin, Josephine Bunch, Iain B Styles, Helen J Cooper

Open access · hybridAbstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Quantitative mass spectrometry imaging: therapeutics & biomolecules.Chemical communications (Cambridge, England) · 2024
    Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Quantitative Mass Spectrometry Imaging of Biological Systems.Annual review of physical chemistry · 2021
    Review
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Jana HavlikovaEPSRC Centre for Doctoral Training in Physical Sciences for Health , University of Birmingham , Birmingham B15 2TT , U.K.
Elizabeth C RandallSchool of Biosciences , University of Birmingham , Birmingham B15 2TT , U.K.
Rian L GriffithsSchool of Pharmacy , University of Nottingham , Nottingham NG7 2RD , U.K.
John G SwalesPathology, Clinical Pharmacology & Safety Sciences, BioPharmaceuticals R&D , AstraZeneca , Cambridge CB4 0WG , U.K.ORCID 0000-0002-4792-0037
Richard J A GoodwinPathology, Clinical Pharmacology & Safety Sciences, BioPharmaceuticals R&D , AstraZeneca , Cambridge CB4 0WG , U.K.
Josephine BunchNational Physical Laboratory , Teddington TW11 0LW , U.K.
Iain B StylesEPSRC Centre for Doctoral Training in Physical Sciences for Health , University of Birmingham , Birmingham B15 2TT , U.K.
Helen J CooperSchool of Biosciences , University of Birmingham , Birmingham B15 2TT , U.K.ORCID 0000-0003-4590-9384
University of Birmingham · GBAstraZeneca (South Korea) · KRNational Physical Laboratory · GBUniversity of Nottingham · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Absolute quantification of proteins in tissue is important for numerous fields of study. Liquid chromatography-mass spectrometry (LC-MS) methods are the norm but typically involve lengthy sample preparation including tissue homogenization, which results in the loss of information relating to spatial distribution. Here, we propose liquid extraction surface analysis (LESA) mass spectrometry (MS) of stable isotope labeled mimetic tissue models for the spatially resolved quantification of intact ubiquitin in rat and mouse brain tissue. Measured ubiquitin concentrations are in agreement with values found in the literature. Images of rat and mouse brain tissue demonstrate spatial variation in the concentration of ubiquitin and demonstrate the utility of spatially resolved quantitative measurement of proteins in tissue. Although we have focused on ubiquitin, the method has the potential for broader application to the absolute quantitation of any endogenous protein or protein-based drug in tissue.

Indexed as

Brain ChemistryAnimalsChromatography, LiquidLiquid-Liquid ExtractionMass SpectrometryMiceRatsUbiquitinUbiquitin

Identifiers

PMID31660728
PMCPMC7007001
OpenAlexW2982523277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.