Evidence map›Paper›PMID 31659034›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Expansion of a single transposable element family is associated with genome-size increase and radiation in the genus

Wai Yee Wong, Oleg Simakov, Diane M Bridge, Paulyn Cartwright, Anthony J Bellantuono, Anne Kuhn, Thomas W Holstein, Charles N David, Robert E Steele, Daniel E Martínez

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 61 citations in OpenAlex.

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  13. The genome of the colonial hydroidGenome research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 8 institutions in 3 countries.

Wai Yee WongDepartment of Molecular Evolution and Development, University of Vienna, 1010 Vienna, Austria.
Oleg SimakovDepartment of Molecular Evolution and Development, University of Vienna, 1010 Vienna, Austria; oleg.simakov@univie.ac.at dem04747@pomona.edu.
Diane M BridgeDepartment of Biology, Elizabethtown College, Elizabethtown, PA 17022.
Paulyn CartwrightDepartment of Ecology & Evolutionary Biology, University of Kansas, Lawrence, KS 66045.ORCID 0000-0002-8174-6933
Anthony J BellantuonoDepartment of Biological Sciences, Florida International University, Miami, FL 33199.
Anne KuhnCentre for Organismal Biology, Heidelberg University, 69120 Heidelberg, Germany.
Thomas W HolsteinCentre for Organismal Biology, Heidelberg University, 69120 Heidelberg, Germany.
Charles N DavidFaculty of Biology, Ludwig Maximilian University of Munich, 80539 Munich, Germany.
Robert E SteeleDepartment of Biological Chemistry, University of California, Irvine, CA 92617.
Daniel E MartínezDepartment of Biology, Pomona College, Claremont, CA 91711 oleg.simakov@univie.ac.at dem04747@pomona.edu.
Heidelberg University · DEUniversity of Vienna · ATElizabethtown College · USFlorida International University · USLudwig-Maximilians-Universität München · DEPomona College · USUniversity of California, Irvine · USUniversity of Kansas · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
Mechanisms underlying lack of senescence and inducible senescence in members of tR01AG037965 · NIA · POMONA COLLEGE · PI MARTINEZ, DANIEL E. · 2010 to 2014
$1.2M
PacBio RS Single Molecule, Real-Time (SMRT) DNA SequencerS10OD010794 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2012 to 2012
$600k
High-Throughput DNA SequencerS10OD021718 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2016 to 2016
$600k
High Throughput DNA SequencerS10RR025496 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2009 to 2009
$500k
Austrian Science Fund FWF P 30686NCI NIH HHS P30 CA062203NCRR NIH HHS S10 RR025496NIA NIH HHS R01 AG037965NIH HHS S10 OD010794NIH HHS S10 OD021718
6 · The paper itself

Abstract

Transposable elements are one of the major contributors to genome-size differences in metazoans. Despite this, relatively little is known about the evolutionary patterns of element expansions and the element families involved. Here we report a broad genomic sampling within the genus

Indexed as

DNA Transposable ElementsEvolution, MolecularAnimalsGenome SizeHydraPhylogenyDNA Transposable Elements

Identifiers

PMID31659034
PMCPMC6859323
OpenAlexW2982615442

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.