Evidence map›Paper›PMID 31657982›Full record

ArticleJournal of clinical oncology : official journal of the American Society of Clinical Oncology2019

Validation of the DNA Damage Immune Response Signature in Patients With Triple-Negative Breast Cancer From the SWOG 9313c Trial.

Priyanka Sharma, William E Barlow, Andrew K Godwin, Eileen E Parkes, Laura A Knight, Steven M Walker, Richard D Kennedy, Denis P Harkin, Gemma E Logan, Christopher J Steele and 12 more

Abstract readValidation Study
In one paragraph

Article in Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Priyanka SharmaUniversity of Kansas Medical Center, Westwood, KS.
William E BarlowSWOG Statistical Center, Seattle, WA.
Andrew K GodwinUniversity of Kansas Medical Center, Kansas City, KS.
Eileen E ParkesQueen's University Belfast, Belfast, UK.
Laura A KnightQueen's University Belfast, Belfast, UK.
Steven M WalkerQueen's University Belfast, Belfast, UK.
Richard D KennedyQueen's University Belfast, Belfast, UK.
Denis P HarkinQueen's University Belfast, Belfast, UK.
Gemma E LoganAlmac Group, Craigavon, UK.
Christopher J SteeleAlmac Group, Craigavon, UK.
Shauna M LambeAlmac Group, Craigavon, UK.
Sunil BadveIndiana University School of Medicine, Indianapolis, IN.
Yesim Gökmen-PolarIndiana University School of Medicine, Indianapolis, IN.
Harsh B PathakUniversity of Kansas Medical Center, Kansas City, KS.
Kamilla IsakovaUniversity of Kansas Medical Center, Kansas City, KS.
Hannah M LindenUniversity of Washington, Seattle, WA.
Peggy PorterFred Hutchinson Cancer Research Center, Seattle, WA.
Lajos PusztaiYale Cancer Center, New Haven, CT.
Alastair M ThompsonBaylor College of Medicine, Houston, TX.
Debu TripathyThe University of Texas MD Anderson Cancer Center, Houston, TX.
Gabriel N HortobagyiThe University of Texas MD Anderson Cancer Center, Houston, TX.
Daniel F HayesUniversity of Michigan, Ann Arbor, MI.

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
SWOG Network Group Operations Center of the NCTNU10CA180888 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI PRIMO N. LARA · 2014 to 2026
$152.1M
SWOG Statistics & Data Management Center complex - extension supplement for GY06U10CA180819 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Michael L. LeBlanc · 2014 to 2026
$115.2M
Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI NICOLE L NOLLEN · 2012 to 2026
$40.1M
Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ANDREW K. GODWIN · 2019 to 2026
$21.5M
UM LAPs -UG1 GrantUG1CA233160 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ANNE F SCHOTT · 2019 to 2026
$5.4M
Hutchinson Center as Lead Academic Participating Site (UG1)UG1CA233328 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Evan Yu · 2019 to 2026
$4.3M
NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA168524NCI NIH HHS U10 CA180819NCI NIH HHS U10 CA180888NCI NIH HHS UG1 CA233160NCI NIH HHS UG1 CA233328NIGMS NIH HHS P20 GM130423
6 · The paper itself

Abstract

purposeTo independently validate two biomarkers, a 44-gene DNA damage immune response (DDIR) signature and stromal tumor-infiltrating lymphocytes (sTILs), as prognostic markers in patients with triple-negative breast cancer (TNBC) treated with adjuvant doxorubicin (A) and cyclophosphamide (C) in SWOG 9313.

methodsFour hundred twenty-five centrally determined patient cases with TNBC from S9313 were identified. DDIR signature was performed on RNA isolated from formalin-fixed paraffin-embedded tumor tissue, and samples were classified as DDIR negative or positive using predefined cutoffs. Evaluation of sTILs was performed as described previously. Markers were tested for prognostic value for disease-free survival (DFS) and overall survival (OS) using Cox regression models adjusted for treatment assignment, nodal status, and tumor size.

resultsAmong 425 patients with TNBC, 33% were node positive. DDIR was tested successfully in 90% of patients (381 of 425), 62% of which were DDIR signature positive. DDIR signature positivity was associated with improved DFS (hazard ratio [HR], 0.67; 95% CI, 0.48 to 0.92;

conclusionThe prognostic role of sTILs and DDIR in early-stage TNBC was confirmed. DDIR signature conferred improved prognosis in two thirds of patients with TNBC treated with adjuvant AC. DDIR signature has the potential to stratify outcome and to identify patients with less projected benefit after AC chemotherapy.

Indexed as

AdultAgedAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorCyclophosphamideDisease-Free SurvivalDNA DamageDoxorubicinFemaleHumansLymphocytes, Tumor-InfiltratingMiddle AgedPrognosisTranscriptomeTriple Negative Breast NeoplasmsBiomarkers, TumorCyclophosphamideDoxorubicin

Identifiers

PMID31657982
PMCPMC7194448

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.