Evidence map›Paper›PMID 31657151›Full record

ReviewWiley interdisciplinary reviews. RNA2020

Connections between 3' end processing and DNA damage response: Ten years later.

Michael Robert Murphy, Frida Esther Kleiman

Open access · greenAbstract readReview
In one paragraph

Review in Wiley interdisciplinary reviews. RNA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Michael Robert MurphyDepartment of Chemistry, Hunter College and Biochemistry Program, The Graduate Center, City University of New York, New York, New York.
Frida Esther KleimanDepartment of Chemistry, Hunter College and Biochemistry Program, The Graduate Center, City University of New York, New York, New York.ORCID 0000-0002-1911-8733
The Graduate Center, CUNY · US

Funding

TUFCCC/HC Regional Comprehensive Cancer Health PartnershipU54CA221705 · NCI · TEMPLE UNIV OF THE COMMONWEALTH · PI Yin Tan · 2018 to 2026
$16.3M
TUFCCC/HC Regional Comprehensive Cancer Health PartnershipU54CA221704 · NCI · HUNTER COLLEGE · PI Ming-Chin Yeh · 2018 to 2026
$10.6M
Role of the mRNA 3’ processing factor CstF-50 in regulating the BRCA1/BARD1 E3 ubiquitin ligase activity during the DNA damage responseR21CA204610 · NCI · HUNTER COLLEGE · PI KLEIMAN, FRIDA E · 2017 to 2018
$373k
National Cancer Institute, National Institutes of Health (NIH) R21 CA204610-01NCI NIH HHS R21 CA204610NCI NIH HHS U54 CA221704NCI NIH HHS U54 CA221705
6 · The paper itself

Abstract

Ten years ago we reviewed how the cellular DNA damage response (DDR) is controlled by changes in the functional and structural properties of nuclear proteins, resulting in a timely coordinated control of gene expression that allows DNA repair. Expression of genes that play a role in DDR is regulated not only at transcriptional level during mRNA biosynthesis but also by changing steady-state levels due to turnover of the transcripts. The 3' end processing machinery, which is important in the regulation of mRNA stability, is involved in these gene-specific responses to DNA damage. Here, we review the latest mechanistic connections described between 3' end processing and DDR, with a special emphasis on alternative polyadenylation, microRNA and RNA binding proteins-mediated deadenylation, and discuss the implications of deregulation of these steps in DDR and human disease. This article is categorized under: RNA Processing > 3' End Processing RNA-Based Catalysis > Miscellaneous RNA-Catalyzed Reactions RNA in Disease and Development > RNA in Disease.

Indexed as

DNA DamageHumansRNA-Binding ProteinsRNA, MessengerRNA-Binding ProteinsRNA, Messenger3′ end processingdeadenylationDNA damage responsepolyadenylation

Identifiers

PMID31657151
PMCPMC7295566
OpenAlexW2981846823

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.