Evidence map›Paper›PMID 31653789›Full record

ArticleApplied and environmental microbiology2019

Rapid Shifts in Bacterial Community Assembly under Static and Dynamic Hydration Conditions in Porous Media.

Hannah Kleyer, Robin Tecon, Dani Or

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hannah KleyerSoil and Terrestrial Environmental Physics, Department of Environmental Systems Science, Swiss Federal Institute of Technology in Zurich (ETH Zürich), Zürich, Switzerland hannah.kleyer@usys.ethz.ch.ORCID 0000-0002-8586-1621
Robin TeconSoil and Terrestrial Environmental Physics, Department of Environmental Systems Science, Swiss Federal Institute of Technology in Zurich (ETH Zürich), Zürich, Switzerland.ORCID 0000-0002-5665-3073
Dani OrSoil and Terrestrial Environmental Physics, Department of Environmental Systems Science, Swiss Federal Institute of Technology in Zurich (ETH Zürich), Zürich, Switzerland.ORCID 0000-0002-3236-2933

Funding

European Research Council 320499
6 · The paper itself

Abstract

The complexity of natural soils presents a challenge to the systematic identification and disentanglement of governing processes that shape natural bacterial communities. Studies have highlighted the critical role of the soil aqueous phase in shaping interactions among soil bacterial communities. To quantify and improve the attributability of soil aqueous-phase effects, we introduced a synthetic and traceable bacterial community to simple porous microcosms and subjected the community to constant or dynamic hydration conditions. The results were expressed in terms of absolute abundance and show species-specific responses to hydration and nutrient conditions. Hydration dynamics exerted a significant influence on the fraction of less-abundant species, especially after extended incubation periods. Phylogenetic relationships did not explain the group of most abundant species. The ability to quantify species-level dynamics in a bacterial community offers an important step toward deciphering the links between community composition and functions in dynamic terrestrial environments.

Indexed as

BacteriaSoil MicrobiologyMetagenomeMetagenomicsMicrobial InteractionsMicrobiotaPhylogenyPorosityRNA, Ribosomal, 16SSoilWaterRNA, Ribosomal, 16SSoilWaterabsolute quantificationbacterial community assemblyFluidigmmicrobial ecologymicrobial interactionsporous mediaquantitative real-time PCR (qPCR)

Identifiers

PMID31653789
PMCPMC6912082

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.