Evidence map›Paper›PMID 31653788›Full record

ArticleApplied and environmental microbiology2019

Proteorhodopsin Overproduction Enhances the Long-Term Viability of Escherichia coli.

Yizhi Song, Michaël L Cartron, Philip J Jackson, Paul A Davison, Mark J Dickman, Di Zhu, Wei E Huang, C Neil Hunter

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Engineering bionanoreactor in bacteria for efficient hydrogen production.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Article
  3. Article
  4. Rhodopsin driven microbial COEnvironmental microbiology · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Revealing COBiodesign research · 2022
    Article
  9. Article
  10. Chromosome-free bacterial cells are safe and programmable platforms for synthetic biology.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yizhi Song *Department of Engineering Science, University of Oxford, Oxford, United Kingdom.
Michaël L Cartron *Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, United Kingdom.
Philip J Jackson *Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, United Kingdom.
Paul A DavisonDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, United Kingdom.
Mark J DickmanChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Sheffield, United Kingdom.
Di ZhuKroto Research Centre, University of Sheffield, Sheffield, United Kingdom.
Wei E HuangDepartment of Engineering Science, University of Oxford, Oxford, United Kingdom wei.huang@eng.ox.ac.uk.
C Neil HunterDepartment of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, United Kingdom.
University of Sheffield · GBScience Oxford · GBUniversity of Oxford · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M000265/1Biotechnology and Biological Sciences Research Council BB/M012166/1
6 · The paper itself

Abstract

Genes encoding the photoreactive protein proteorhodopsin (PR) have been found in a wide range of marine bacterial species, reflecting the significant contribution that PR makes to energy flux and carbon cycling in ocean ecosystems. PR can also confer advantages to enhance the ability of marine bacteria to survive periods of starvation. Here, we investigate the effect of heterologously produced PR on the viability of

Indexed as

Rhodopsins, MicrobialBacterial ProteinsCell MembraneCell SurvivalEscherichia coliOceans and SeasProton PumpsRecombinant ProteinsShewanellaSingle-Cell AnalysisSpectrum Analysis, RamanVibrioBacterial ProteinsproteorhodopsinProton PumpsRecombinant ProteinsRhodopsins, Microbialcell membranescell viabilityEscherichia colimarine bacteriamembraneproteorhodopsinRaman spectroscopysingle cells

Identifiers

PMID31653788
PMCPMC6912077
OpenAlexW2981706723

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.