Evidence map›Paper›PMID 31651956›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2020

Imputation and characterization of uncoded self-harm in major mental illness using machine learning.

Praveen Kumar, Anastasiya Nestsiarovich, Stuart J Nelson, Berit Kerner, Douglas J Perkins, Christophe G Lambert

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02893371 (Longitudinal Comparative Effectiveness of Bipolar Disorder Therapies), which is not on this map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02893371 terminatednot on this map

Longitudinal Comparative Effectiveness of Bipolar Disorder Therapies

TypeobservationalSponsorUniversity of New MexicoRan2016 to 2019Enrolled1,037,352ConditionsBipolar DisorderArmsLithium Carbonate, Lamotrigine, Valproic Acid, Oxcarbazepine, Carbamazepine
3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Detecting Opioid Use Disorder in Health Claims Data With Positive Unlabeled Learning.IEEE journal of biomedical and health informatics · 2025
    Article
  5. Unsupervised algorithms to identify potential under-coding of secondary diagnoses in hospitalisations databases in Portugal.Health information management : journal of the Health Information Management Association of Australia · 2024
    Article
  6. Accuracy of ICD-10-CM encounter diagnoses from health records for identifying self-harm events.Journal of the American Medical Informatics Association : JAMIA · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Praveen KumarCenter for Global Health, Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA.
Anastasiya NestsiarovichCenter for Global Health, Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA.
Stuart J NelsonBiomedical Informatics Center, Department of Clinical Research & Leadership, George Washington University, Washington, DC, USA.
Berit KernerSemel Institute for Neuroscience and Human Behavior, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, USA.
Douglas J PerkinsCenter for Global Health, Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA.
Christophe G LambertCenter for Global Health, Department of Internal Medicine, University of New Mexico Health Sciences Center, Albuquerque, New Mexico, USA.
University of New Mexico · USGeorge Washington University · USUniversity of California, Los Angeles · US

Funding

UNM HSC Clinical and Translational Science CenterUL1TR001449 · NCATS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CAMPEN, MATTHEW J, PANDHI, NANCY · 2015 to 2024
$36.9M
NCATS NIH HHS UL1 TR001449
6 · The paper itself

Abstract

objectiveWe aimed to impute uncoded self-harm in administrative claims data of individuals with major mental illness (MMI), characterize self-harm incidence, and identify factors associated with coding bias. MATERIALS AND

methodsThe IBM MarketScan database (2003-2016) was used to analyze visit-level self-harm in 10 120 030 patients with ≥2 MMI codes. Five machine learning (ML) classifiers were tested on a balanced data subset, with XGBoost selected for the full dataset. Classification performance was validated via random data mislabeling and comparison with a clinician-derived "gold standard." The incidence of coded and imputed self-harm was characterized by year, patient age, sex, U.S. state, and MMI diagnosis.

resultsImputation identified 1 592 703 self-harm events vs 83 113 coded events, with areas under the curve >0.99 for the balanced and full datasets, and 83.5% agreement with the gold standard. The overall coded and imputed self-harm incidence were 0.28% and 5.34%, respectively, varied considerably by age and sex, and was highest in individuals with multiple MMI diagnoses. Self-harm undercoding was higher in male than in female individuals and increased with age. Substance abuse, injuries, poisoning, asphyxiation, brain disorders, harmful thoughts, and psychotherapy were the main features used by ML to classify visits. DISCUSSION: Only 1 of 19 self-harm events was coded for individuals with MMI. ML demonstrated excellent performance in recovering self-harm visits. Male individuals and seniors with MMI are particularly vulnerable to self-harm undercoding and may be at risk of not getting appropriate psychiatric care.

conclusionsML can effectively recover unrecorded self-harm in claims data and inform psychiatric epidemiological and observational studies.

Indexed as

Electronic Health RecordsMachine LearningSuicidal IdeationAdultAlgorithmsClassificationClinical CodingDatasets as TopicFemaleHumansIncidenceMaleMental DisordersSelf-Injurious Behaviorcodingelectronic health recordsmachine learningself-harmsuicide

Identifiers

PMID31651956
PMCPMC7647246
OpenAlexW2982084014

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.