Evidence map›Paper›PMID 31650730›Full record

ArticleAnnals of laboratory medicine2020

Evaluation of the QuantaMatrix Multiplexed Assay Platform for Molecular Diagnosis of Multidrug- and Extensively Drug-Resistant Tuberculosis Using Clinical Strains Isolated in Myanmar.

Yunhee Chang, Seoyong Kim, Yeun Kim, Phyu Win Ei, Dasom Hwang, Jongseok Lee, Chulhun L Chang, Hyeyoung Lee

Open access · diamondAbstract readEvaluation Study
In one paragraph

Article in Annals of laboratory medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yunhee ChangDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea.ORCID https://orcid.org/0000-0003-1857-1955
Seoyong KimDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea.ORCID https://orcid.org/0000-0002-0071-3954
Yeun KimDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea.ORCID https://orcid.org/0000-0002-5584-3318
Phyu Win EiDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea.ORCID https://orcid.org/0000-0002-2486-3260
Dasom HwangDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea.ORCID https://orcid.org/0000-0002-3426-8932
Jongseok LeeInternational Tuberculosis Research Center, Changwon, Korea.ORCID https://orcid.org/0000-0002-4340-9856
Chulhun L ChangDepartment of Laboratory Medicine, Pusan National University Yangsan Hospital, Yangsan, Korea.ORCID https://orcid.org/0000-0001-9117-4919
Hyeyoung LeeDepartment of Biomedical Laboratory Science, College of Health Sciences, Yonsei University, Wonju, Korea. Hyelee@yonsei.ac.kr.ORCID https://orcid.org/0000-0003-1572-5250
Yonsei University · KRInternational Tuberculosis Research Center · KRPusan National University Yangsan Hospital · KR

Funding

National Research Foundation of Korea NRF-2016S1A5B8925203
6 · The paper itself

Abstract

backgroundAlthough the incidence of tuberculosis (TB) is decreasing, cases of multidrug-resistant (MDR) TB and extensively drug-resistant (XDR) TB continue to increase. As conventional phenotype drug susceptibility testing (pDST) takes six to eight weeks, molecular assays are widely used to determine drug resistance. we developed QuantaMatrix Multiplexed Assay Platform (QMAP) MDR/XDR assay (QuantaMatrix Inc., Seoul, Korea) that can simultaneously detect mutations related to both first- and second-line drug resistance (rifampin, isoniazid, ethambutol, fluoroquinolones, second-line injectable drugs, and streptomycin).

methodsWe used 190 clinical

resultsQMAP results were 87.9% (167/190) concordant with pDST results. In the 23 isolates with discordant results, the QMAP and DNA sequencing results completely matched.

conclusionsThe QMAP MDR/XDR assay can detect all known DNA mutations associated with drug resistance for both MDR- and XDR-MTB strains. It can be used for molecular diagnosis of MDR- and XDR-TB to rapidly initiate appropriate anti-TB drug therapy.

Indexed as

Antitubercular AgentsDNA, BacterialDrug Resistance, Multiple, BacterialExtensively Drug-Resistant TuberculosisHumansMicrobial Sensitivity TestsMultiplex Polymerase Chain ReactionMutationMyanmarMycobacterium tuberculosisPhenotypeSequence Analysis, DNATuberculosis, Multidrug-ResistantAntitubercular AgentsDNA, BacterialExtensively drug-resistant tuberculosisMultidrug-resistant tuberculosisMycobacterium tuberculosisQuantaMatrix Multiplexed Assay Platform

Identifiers

PMID31650730
PMCPMC6821996
OpenAlexW2982243277

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.