Evidence map›Paper›PMID 31649034›Full record

ArticleThe Journal of biological chemistry2019

High-throughput screening yields several small-molecule inhibitors of repeat-associated non-AUG translation.

Katelyn M Green, Udit J Sheth, Brittany N Flores, Shannon E Wright, Alexandra B Sutter, Michael G Kearse, Sami J Barmada, Magdalena I Ivanova, Peter K Todd

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

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  16. Inducible expression of humanDisease models & mechanisms · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Katelyn M GreenDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, Michigan 48109.
Udit J ShethDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109.
Brittany N FloresDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, Michigan 48109.
Shannon E WrightDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109.
Alexandra B SutterDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109.
Michael G KearseDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Department of Biological Chemistry and Pharmacology, Center for RNA Biology, Ohio State University, Columbus, Ohio 43210.
Sami J BarmadaDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, Michigan 48109.
Magdalena I IvanovaDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Biophysics Program, University of Michigan, Ann Arbor, Michigan 48109.
Peter K ToddDepartment of Neurology, University of Michigan, Ann Arbor, Michigan 48109; Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, Michigan 48109; Veterans Affairs Ann Arbor Healthcare System, Ann Arbor, Michigan 48105. Electronic address: petertod@umich.edu.
University of Michigan · US

Funding

CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
Hexanucleotide repeat translation in ALS and Frontotemporal DementiaR01NS099280 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter K Todd · 2016 to 2026
$4.9M
CGG repeat associated translation in Fragile X-associated Tremor/Ataxia Syndrome-Diversity SupplementR01NS086810 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TODD, PETER K · 2014 to 2024
$4.1M
RNA decay in amyotrophic lateral sclerosis and frontotemporal lobar degenerationR01NS097542 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BARMADA, SAMI · 2016 to 2025
$3.8M
Integrating Quality Control: Studies of UBQLN2 in Age-Related NeurodegenerationR01NS096785 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI IVANOVA, MAGDALENA I, PAULSON, HENRY L · 2016 to 2020
$3.4M
Determining the role of RNA-based factors in RAN translation of C9ALS/FTD-associated GGGGCC repeatsF31NS100302 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GREEN, KATELYN MARIE · 2017 to 2019
$125k
Mechanisms of CGG RAN translation in Fragile X-associated tremor/ataxia syndromeF32NS089124 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KEARSE, MICHAEL G · 2014 to 2015
$108k
BLRD VA I01 BX003231BLRD VA I21 BX001841NIGMS NIH HHS T32 GM007315NINDS NIH HHS F31 NS100302NINDS NIH HHS F32 NS089124NINDS NIH HHS R01 NS086810NINDS NIH HHS R01 NS096785NINDS NIH HHS R01 NS097542NINDS NIH HHS R01 NS099280
6 · The paper itself

Abstract

Repeat-associated non-AUG (RAN) translation is a noncanonical translation initiation event that occurs at nucleotide-repeat expansion mutations that are associated with several neurodegenerative diseases, including fragile X-associated tremor ataxia syndrome (FXTAS), ALS, and frontotemporal dementia (FTD). Translation of expanded repeats produces toxic proteins that accumulate in human brains and contribute to disease pathogenesis. Consequently, RAN translation constitutes a potentially important therapeutic target for managing multiple neurodegenerative disorders. Here, we adapted a previously developed RAN translation assay to a high-throughput format to screen 3,253 bioactive compounds for inhibition of RAN translation of expanded CGG repeats associated with FXTAS. We identified five diverse small molecules that dose-dependently inhibited CGG RAN translation, while relatively sparing canonical translation. All five compounds also inhibited RAN translation of expanded GGGGCC repeats associated with ALS and FTD. Using CD and native gel analyses, we found evidence that three of these compounds, BIX01294, CP-31398, and propidium iodide, bind directly to the repeat RNAs. These findings provide proof-of-principle supporting the development of selective small-molecule RAN translation inhibitors that act across multiple disease-causing repeats.

Indexed as

Amyotrophic Lateral SclerosisAnimalsAtaxiaAzepinesCells, CulturedCircular DichroismDNA Repeat ExpansionDrug Evaluation, PreclinicalFragile X SyndromeHEK293 CellsHumansNeurodegenerative DiseasesPropidiumPyrimidinesQuinazolinesRatsAzepinesBIX 01294CP 31398PropidiumPyrimidinesQuinazolinesamyotrophic lateral sclerosis (ALS) (Lou Gehrig disease)C9orf72drug screeningFXTASLou Gehrig's diseaseneurodegenerationRAN translationRNAsmall moleculetranslation

Identifiers

PMID31649034
PMCPMC6901296
OpenAlexW2981866831

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.