Evidence map›Paper›PMID 31648983›Full record

ArticleEBioMedicine2019

Redefining malignant pleural mesothelioma types as a continuum uncovers immune-vascular interactions.

Nicolas Alcala, Lise Mangiante, Nolwenn Le-Stang, Corinne E Gustafson, Sandrine Boyault, Francesca Damiola, Karine Alcala, Marie Brevet, Françoise Thivolet-Bejui, Cécile Blanc-Fournier and 32 more

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. Moving Beyond Morphology: Toward a Morpho-Molecular Classification of Pleural Mesothelioma.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Review
  3. Multiomic, Histologic, and scRNA-seq Profiling of Pleural Mesothelioma Reveals Negative Prognosis Associated With a Novel Uncommitted Molecular Phenotype.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
  4. Article
  5. Advances in the Basic Sciences in Thoracic Oncology in the Last 20 Years and Their Translational Impact.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 14 institutions in 2 countries.

Nicolas AlcalaSection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France.
Lise MangianteSection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France.
Nolwenn Le-StangDepartment of Pathology, Centre Léon Bérard (CLB), Lyon, France.
Corinne E GustafsonDivision of Thoracic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Sandrine BoyaultTranslational Research and Innovation Platform, Cancer Research Centre of Lyon (CRCL), Lyon, France.
Francesca DamiolaDepartment of Pathology, Centre Léon Bérard (CLB), Lyon, France.
Karine AlcalaSection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France.
Marie BrevetPathology Institute, Hospices Civils de Lyon, University Claude Bernard Lyon 1, France.
Françoise Thivolet-BejuiPathology Institute, Hospices Civils de Lyon, University Claude Bernard Lyon 1, France.
Cécile Blanc-FournierCaen University Hospital, CHU Caen, Caen, France.
Jean-Philippe Le RochaisCaen University Hospital, CHU Caen, Caen, France.
Gaëtane PlanchardCaen University Hospital, CHU Caen, Caen, France.
Nathalie RousseauCaen University Hospital, CHU Caen, Caen, France.
Diane DamotteParis Centre University Hospital, Paris, France.
Jean Claude PaironCentre Hospitalier Intercommunal Créteil, Créteil, Paris, France.
Marie Christine CopinLille University Hospital, Lille, France.
Arnaud ScherpereelLille University Hospital, Lille, France.
Eric WasielewskiLille University Hospital, Lille, France.
Laurence WicquartLille University Hospital, Lille, France.
Stéphanie LacommeNancy University Hospital, Nancy, France.
Jean-Michel VignaudNancy University Hospital, Nancy, France.
Gaspard AncelinNantes University Hospital, Nantes, France.
Cécile GirardNantes University Hospital, Nantes, France.
Christine SaganNantes University Hospital, Nantes, France.
Christelle BonnetaudNice University Hospital, Nice, France.
Véronique HofmanNice University Hospital, Nice, France.
Paul HofmanNice University Hospital, Nice, France.
Jérôme MourouxNice University Hospital, Nice, France.
Vincent Thomas de MontprevilleMarie Lannelongue Hospital, Le Plessis Robinson, France.
Estelle Clermont-TaranchonToulouse University Hospital, Toulouse, France.
Julien MazieresToulouse University Hospital, Toulouse, France.
Isabelle RouquetteToulouse University Hospital, Toulouse, France.
Hugues BegueretBordeaux University Hospital, Bordeaux, France.
Jean-Yves BlayDepartment of Medical Oncology, Centre Léon Bérard (CLB), Lyon, France; European Reference Network (ENR-EURACAN), France.
Sylvie LantuejoulDepartment of Pathology, Centre Léon Bérard (CLB), Lyon, France; University Grenoble Alpes, Grenoble, France.
Raphael BuenoDivision of Thoracic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Christophe CauxDepartment of Immunity, Virus, and Inflammation, Cancer Research Centre of Lyon (CRCL), Lyon, France.
Nicolas GirardEuropean Reference Network (ENR-EURACAN), France; University Lyon 1, Lyon, France; INSERM U932, Paris, France; Institut Curie, Paris, France.
James D McKaySection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France.
Matthieu FollSection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France.
Françoise Galateau-SalleDepartment of Pathology, Centre Léon Bérard (CLB), Lyon, France.
Lynnette Fernandez-CuestaSection of Genetics, International Agency for Research on Cancer (IARC-WHO), Lyon, France. Electronic address: fernandezcuestal@iarc.fr.
Centre international de recherche sur le cancer · FRCentre Léon Bérard · FRCentre Hospitalier Universitaire de Caen Normandie · FRCentre Hospitalier Universitaire de Nice · FRUniversité de Lille · FRNantes Université · FRUniversité Claude Bernard Lyon 1 · FRUniversité Fédérale de Toulouse Midi-Pyrénées · FRBrigham and Women's Hospital · USCentre de Recherche en Cancérologie de Lyon · FRCentre Hospitalier Régional et Universitaire de Nancy · FRBordeaux Population Health · FRHôpital Intercommunal de Créteil · FRHôpital Marie Lannelongue · FR

Funding

Validation of Prognostic and Diagnostic Molecular Tests in MesotheliomaR01CA120528 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI BUENO, RAPHAEL · 2006 to 2021
$4.8M
NCI NIH HHS R01 CA120528World Health Organization 001
6 · The paper itself

Abstract

backgroundMalignant Pleural Mesothelioma (MPM) is an aggressive disease related to asbestos exposure, with no effective therapeutic options.

methodsWe undertook unsupervised analyses of RNA-sequencing data of 284 MPMs, with no assumption of discreteness. Using immunohistochemistry, we performed an orthogonal validation on a subset of 103 samples and a biological replication in an independent series of 77 samples.

findingsA continuum of molecular profiles explained the prognosis of the disease better than any discrete model. The immune and vascular pathways were the major sources of molecular variation, with strong differences in the expression of immune checkpoints and pro-angiogenic genes; the extrema of this continuum had specific molecular profiles: a "hot" bad-prognosis profile, with high lymphocyte infiltration and high expression of immune checkpoints and pro-angiogenic genes; a "cold" bad-prognosis profile, with low lymphocyte infiltration and high expression of pro-angiogenic genes; and a "VEGFR2+/VISTA+" better-prognosis profile, with high expression of immune checkpoint VISTA and pro-angiogenic gene VEGFR2. We validated the gene expression levels at the protein level for a subset of five selected genes belonging to the immune and vascular pathways (CD8A, PDL1, VEGFR3, VEGFR2, and VISTA), in the validation series, and replicated the molecular profiles as well as their prognostic value in the replication series.

interpretationThe prognosis of MPM is best explained by a continuous model, which extremes show specific expression patterns of genes involved in angiogenesis and immune response.

Indexed as

Disease SusceptibilityBiomarkers, TumorFemaleGene Expression ProfilingHumansImmunohistochemistryLung NeoplasmsMaleMesotheliomaMesothelioma, MalignantNeovascularization, PathologicPleural NeoplasmsTranscriptomeTumor MicroenvironmentBiomarkers, TumorAngiogenesisFrench MESOBANKImmunotherapyMESOMICS projectPleural mesothelioma

Identifiers

PMID31648983
PMCPMC6838392
OpenAlexW2981442353

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.