Evidence map›Paper›PMID 31648320›Full record

ArticleBlood advances2019

BCL2L1 is associated with γ-globin gene expression.

Yan Dai, Elmutaz M Shaikho, Jessica Perez, Carolyn A Wilson, Lesley Y Liu, Mitchell R White, John J Farrell, David H K Chui, Paola Sebastiani, Martin H Steinberg

Open access · goldAbstract read
In one paragraph

Article in Blood advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Yan DaiDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Elmutaz M ShaikhoDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Jessica PerezDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Carolyn A WilsonDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Lesley Y LiuDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Mitchell R WhiteDepartment of Medicine, Boston University School of Medicine, Boston, MA.
John J FarrellDepartment of Medicine, Boston University School of Medicine, Boston, MA.
David H K ChuiDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Paola SebastianiDepartment of Biostatistics, Boston University School of Public Health, Boston, MA.
Martin H SteinbergDepartment of Medicine, Boston University School of Medicine, Boston, MA.
Boston University · US

Funding

Genetic Modulation of Sickle Cell DiseaseR01HL068970 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI STEINBERG, MARTIN H. · 2001 to 2010
$7.0M
Genome-Wide Association Studies in Sickle Cell Anemia and in CentenariansR01HL087681 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI STEINBERG, MARTIN H. · 2007 to 2010
$6.0M
RESEARCH TRAINING IN BLOOD DISEASES AND RESOURCEST32HL007501 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LERNER, ADAM, STEINBERG, MARTIN H. · 1985 to 2018
$5.4M
Genetic Diversity of Sickle Cell AnemiaRC2HL101212 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI STEINBERG, MARTIN H. · 2009 to 2010
$3.0M
Mechanisms of cis-acting HbF regulation in sickle cell anemiaR01HL133350 · NHLBI · BOSTON MEDICAL CENTER · PI MURPHY, GEORGE J, STEINBERG, MARTIN H. · 2017 to 2020
$1.7M
The Role of Sirt1 in Prostate Cancer Cell Adhesion and ProgressionR21CA141036 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI DAI, YAN · 2009 to 2010
$393k
QUANTSTUDIO 12K FLEX OPEN ARRAY REAL-TIME PCR SYSTEMS10OD023663 · OD · BOSTON MEDICAL CENTER · PI DENG, LINGYI L · 2017 to 2017
$186k
NCI NIH HHS R21 CA141036NHLBI NIH HHS R01 HL068970NHLBI NIH HHS R01 HL087681NHLBI NIH HHS R01 HL133350NHLBI NIH HHS RC2 HL101212NHLBI NIH HHS T32 HL007501NIH HHS S10 OD023663
6 · The paper itself

Abstract

Fetal hemoglobin (HbF) expression is partially governed by the trans-acting quantitative trait loci BCL11A and MYB and a cis-acting locus linked to the HBB gene cluster. Our previous analysis of the Genotype-Tissue Expression database suggested that BCL2L1 was associated with HbF gene expression. In erythroid progenitors from patients with sickle cell disease, BCL2L1 messenger RNA (mRNA) levels were positively correlated with HBG mRNA and total HbF concentration (r2 = 0.72, P = .047 and r2 = 0.68, P = .01, respectively). Inhibition of BCL2L1 protein activity in HbF-expressing HUDEP-1 cells decreased HBG expression in a dose-dependent manner. Overexpression of BCL2L1 in these cells increased HBG expression fourfold (P < .05) and increased F cells by 13% (P < .05). Overexpression of BCL2L1 in erythroid progenitors derived from primary adult CD34+ cells upregulated HBG expression 11-fold (P < .05), increased F cells by 18% (P < .01), did not significantly affect cell differentiation or proliferation, and had a minor effect on survival. Although the mechanism remains unknown, our results suggest that BCL2L1 is associated with HbF gene activation.

Indexed as

Gene Expression RegulationAnemia, Sickle CellAntineoplastic Agentsbcl-X ProteinBiomarkersCell DifferentiationCell LineCell ProliferationCell SurvivalEctopic Gene ExpressionErythroid Precursor Cellsgamma-GlobinsHematopoietic Stem CellsHumansAntineoplastic AgentsBCL2L1 protein, humanbcl-X ProteinBiomarkersgamma-Globins

Identifiers

PMID31648320
PMCPMC6849934
OpenAlexW2980355056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.