Evidence map›Paper›PMID 31647031›Full record

ArticleInfectious diseases of poverty2019

Phylogeny of certain members of Hyrcanus group (Diptera: Culicidae) in China based on mitochondrial genome fragments.

Hui-Min Zhu, Shu-Han Luo, Man Gao, Feng Tao, Jing-Peng Gao, Han-Ming Chen, Xiang-Yu Li, Heng Peng, Ya-Jun Ma

Open access · goldAbstract read
In one paragraph

Article in Infectious diseases of poverty, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Hui-Min ZhuCollege of Basic Medical Sciences, Second Military Medical University, Shanghai, 200433, China.
Shu-Han LuoCollege of Basic Medical Sciences, Second Military Medical University, Shanghai, 200433, China.
Man GaoCollege of Basic Medical Sciences, Second Military Medical University, Shanghai, 200433, China.
Feng TaoDepartment of Naval Medicine, Second Military Medical University, Shanghai, 200433, China.
Jing-Peng GaoDepartment of Naval Medicine, Second Military Medical University, Shanghai, 200433, China.
Han-Ming ChenDepartment of Naval Medicine, Second Military Medical University, Shanghai, 200433, China.
Xiang-Yu LiDepartment of Medical Microbiology and Parasitology, Second Military Medical University, Shanghai, 200433, China.
Heng PengDepartment of Medical Microbiology and Parasitology, Second Military Medical University, Shanghai, 200433, China. pengheng0923@126.com.
Ya-Jun MaDepartment of Naval Medicine, Second Military Medical University, Shanghai, 200433, China. yajun_ma@163.com.ORCID http://orcid.org/0000-0001-9729-9149
Second Military Medical University · CN

Funding

Infective Diseases Prevention and Cure Project of China 2017ZX10303404-002National Natural Science Foundation of China 81371848
6 · The paper itself

Abstract

backgroundSpecies of the Anopheles hyrcanus group are widely distributed in Palearctic and Oriental regions and some of them are important malaria vectors. The cryptic species of An. hyrcanus group was almost impossible to identify based only on their morphology. The phylogenetic relationship of An. hyrcanus group was also not clear.

methodsFive members of An. hyrcanus group were identified by rDNA ITS2 sequencing as An. yatsushiroensis, An. belenrae, An. kleini, An. lesteri and An. sineroides. The mitochondrial genome fragments were sequenced and annotated using the mitochondrial genome of An. sinensis as reference. Based on the four segments and Joint Data sequences of these species, and other four anopheline species downloaded from GenBank, intraspecific as well as interspecific genetic distances were calculated and the phylogenetic trees were reconstructed by the methods of neighbor joining, maximum parsimony, minimum evolution and maximum likelihood.

findingsFour parts of mitochondrial genomes, which were partial fragments COI + tRNA + COII (F5), ATP6 + COIII(F7 + F8), ND1(F19) and lrRNA (F21), were obtained. All fragments were connected as one sequence (referred as Joint Data), which had a total length of 3393 bp. All fragment sequences were highly conservative within species, with the maximum p distance (0.026) calculated by F19 of An. belenrae. The pairwise interspecific p distance calculated by each fragment showed minor or even no difference among An. sinensis, An. kleini and An. belenrae. However, interspecific p distances calculated by the Joint Data sequence ranged from 0.004 (An. belenrae vs An. kleini) to 0.089 (An. sineroides vs An. minimus), and the p distances of the six members of An. hyrcanus group were all less than 0.029. The phylogenetic tree showed two major clades: all subgenus Anopheles species (including six members of An. hyrcanus group, An. atroparvus and An. quadrimaculatus A) and subgenus Cellia (including An. dirus and An. minimus). The An. hyrcanus group was divided into two clusters as ((An. lesteri, An. sineroides) An. yatsushiroensis) and ((An. belenrae, An. sinensis) An. kleini)).

conclusionsThe An. hyrcanus group in this study could be divided into two clusters, in one of which An. belenrae, An. sinensis and An. kleini were most closely related. More molecular markers would make greater contribution to phylogenetic analysis.

Indexed as

Genome, MitochondrialPhylogenyAnimalsAnophelesChinaMosquito VectorsAnopheles hyrcanus groupMitochondrial genome fragmentPhylogenetic relationship

Identifiers

PMID31647031
PMCPMC6806543
OpenAlexW2981559583

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.