Evidence map›Paper›PMID 31646978›Full record

ArticleBMC genetics2019

Rice of Northeast India harbor rich genetic diversity as measured by SSR markers and Zn/Fe content.

Vanlalsanga, S Priyokumar Singh, Y Tunginba Singh

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In one paragraph

Article in BMC genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

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12citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Genetic relationship, population structure analysis and pheno-molecular characterization of rice (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  11. Association of molecular markers with physio-biochemical traits related to seed vigour in rice.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  12. Article
4 · The record

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5 · Who and what money

Authors and funding

3 authors.

VanlalsangaDepartment of Botany, Mizoram University, Aizawl, Mizoram, India.
S Priyokumar SinghDepartment of Botany, Mizoram University, Aizawl, Mizoram, India.
Y Tunginba SinghDepartment of Botany, Mizoram University, Aizawl, Mizoram, India. tunginba@mzu.edu.in.ORCID 0000-0001-5373-4647

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRice (Oryza sativa L.) is one of the most important crops of the world and a major staple food for half of the World's human population. The Northeastern (NE) region of India lies in the Indo-Burma biodiversity hotspot and about 45% of the total flora of the country is found in the region. Local rice cultivars from different states of NE India were analyzed for genetic diversity and population structure using microsatellite markers, and their zinc and iron content.

resultsA total of 149 bands were detected using twenty-two microsatellite markers comprising both random and trait-linked markers, showing 100% polymorphism and high value of expected heterozygosity (0.6311) and the polymorphism information content (0.5895). Nali Dhan cultivar of Arunachal Pradesh possessed the highest genetic diversity (0.3545) among studied populations while Moirangphou Khonganbi of Manipur exhibited the lowest genetic diversity (0.0343). The model-based population structure revealed that all the studied 65 rice cultivars were grouped into two clusters. Cluster I was represented by 36 cultivars and cluster II by 29 cultivars. Badalsali cultivar of Assam possessed the highest Zn content (75.8 μg/g) and Kapongla from Manipur possessed the lowest (17.98 μg/g). The highest and the lowest Fe content was found in Fazu (215.62 μg/g) and Idaw (11.42 μg/g) of Mizoram.

conclusionThe result suggested rice cultivars of NE India possessing high genetic diversity (Nali dhan), high Zn (Badalsali) and Fe (Fazu) content can be useful as a source of germplasm for future rice improvement programs.

Indexed as

Microsatellite RepeatsGenetic VariationIndiaIronModels, GeneticOryzaPhylogenyZincIronZincGenetic diversityMicrosatellite markerNortheast IndiaRice landracesZn/ Fe content

Identifiers

PMID31646978
PMCPMC6806518

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