Evidence map›Paper›PMID 31646363›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Association mapping of wheat Fusarium head blight resistance-related regions using a candidate-gene approach and their verification in a biparental population.

Karolina Maria Słomińska-Durdasiak, Sonja Kollers, Viktor Korzun, Daniela Nowara, Patrick Schweizer, Armin Djamei, Jochen Christoph Reif

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Karolina Maria Słomińska-DurdasiakDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany. slominska@ipk-gatersleben.de.ORCID http://orcid.org/0000-0003-2234-9396
Sonja KollersKWS LOCHOW GmbH, Ferdinand-von-Lochow-Straße 5, 29303, Bergen, Germany.
Viktor KorzunKWS LOCHOW GmbH, Ferdinand-von-Lochow-Straße 5, 29303, Bergen, Germany.ORCID http://orcid.org/0000-0003-0760-8249
Daniela NowaraDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany.ORCID http://orcid.org/0000-0001-5694-5992
Patrick SchweizerDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany.ORCID http://orcid.org/0000-0002-8538-479X
Armin DjameiDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany.ORCID http://orcid.org/0000-0002-8087-9566
Jochen Christoph ReifDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, 06466, Gatersleben, Germany.ORCID http://orcid.org/0000-0002-6742-265X
Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DE

Funding

H2020 Marie Skłodowska-Curie Actions 674964
6 · The paper itself

Abstract

key messageMarkers, located in Dicer1 and Ara6 genes, which are likely involved in cross-kingdom RNA trafficking, are associated with FHB resistance in GABI wheat population and were validated in biparental population. Association studies are a common approach to detect marker-trait associations for Fusarium head blight (FHB) resistance in wheat (Triticum aestivum), although verification of detected associations is exceptional. In the present study, candidate-gene association mapping (CG) of genes from silencing and secretory pathways, which may be involved in wheat resistance against FHB and cross-kingdom RNA trafficking, was performed. Fourteen markers, located in nine genes, were tested for association with FHB resistance in 356 lines from the GABI (genome analysis of the biological system of plants) wheat population. Three markers located in the genes Dicer1 and Ara6 were shown to be significantly associated with the studied trait. Verification of this finding was performed using the recombinant inbred lines (RILs) population 'Apache × Biscay', segregating for four of our 14 selected markers. We could show association of the Ara6 marker with plant height as well as association with FHB resistance for three markers located in Rab5-like GTPase gene Ara6 and Dicer1. These results confirmed the trait-marker associations detected also in the CG approach. Gene products of the associated genes are involved in response of the plant to pathogens, plant metabolism and may be involved in cross-kingdom RNA trafficking efficiency. The markers detected in the GABI wheat population, which were also validated in the biparental population, can potentially be used in wheat breeding.

Indexed as

Chromosome MappingGenetic Association StudiesAllelesDisease ResistanceFusariumGenes, PlantGenetic MarkersPlant DiseasesSelection, GeneticTriticumGenetic Markers

Identifiers

PMID31646363
OpenAlexW2981350613

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.