Evidence map›Paper›PMID 31645450›Full record

ArticleJournal of virology2020

Surfeit 4 Contributes to the Replication of Hepatitis C Virus Using Double-Membrane Vesicles.

Lingbao Kong, Haruyo Aoyagi, Zibing Yang, Tao Ouyang, Mami Matsuda, Akira Fujimoto, Koichi Watashi, Ryosuke Suzuki, Minetaro Arita, Satoshi Yamagoe and 6 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Lingbao Kong *Department of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Haruyo Aoyagi *Department of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Zibing YangInstitute of Pathogenic Microorganism, Jiangxi Agricultural University, Nanchang, Jiangxi, China.
Tao OuyangInstitute of Pathogenic Microorganism, Jiangxi Agricultural University, Nanchang, Jiangxi, China.
Mami MatsudaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Akira FujimotoDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Koichi WatashiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Ryosuke SuzukiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Minetaro AritaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Satoshi YamagoeDepartment of Chemotherapy and Mycoses, National Institute of Infectious Diseases, Tokyo, Japan.
Naoshi DohmaeGlobal Research Cluster, Riken, Tokyo, Japan.
Takehiro SuzukiGlobal Research Cluster, Riken, Tokyo, Japan.
Tetsuro SuzukiDepartment of Infectious Diseases, Hamamatsu University School of Medicine, Hamamatsu, Shizuoka, Japan.
Masamichi MuramatsuDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Takaji WakitaDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan.
Hideki AizakiDepartment of Virology II, National Institute of Infectious Diseases, Tokyo, Japan aizaki@nih.go.jp.
National Institute of Infectious Diseases · JPJiangxi Agricultural University · CNHamamatsu University School of Medicine · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A number of positive-strand RNA viruses, such as hepatitis C virus (HCV) and poliovirus, use double-membrane vesicles (DMVs) as replication sites. However, the role of cellular proteins in DMV formation during virus replication is poorly understood. HCV NS4B protein induces the formation of a "membranous web" structure that provides a platform for the assembly of viral replication complexes. Our previous screen of NS4B-associated host membrane proteins by dual-affinity purification, liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS), and small interfering RNA (siRNA) methods revealed that the Surfeit 4 (Surf4) gene, which encodes an integral membrane protein, is involved in the replication of the JFH1 subgenomic replicon. Here, we investigated in detail the effect of Surf4 on HCV replication. Surf4 affects HCV replication in a genotype-independent manner, whereas HCV replication does not alter Surf4 expression. The influence of Surf4 on HCV replication indicates that while Surf4 regulates replication, it has no effect on entry, translation, assembly, or release. Analysis of the underlying mechanism showed that Surf4 is recruited into HCV RNA replication complexes by NS4B and is involved in the formation of DMVs and the structural integrity of RNA replication complexes. Surf4 also participates in the replication of poliovirus, which uses DMVs as replication sites, but it has no effect on the replication of dengue virus, which uses invaginated/sphere-type vesicles as replication sites. These findings clearly show that Surf4 is a novel cofactor that is involved in the replication of positive-strand RNA viruses using DMVs as RNA replication sites, which provides valuable clues for DMV formation during positive-strand RNA virus replication.

Indexed as

Cell Line, TumorCell Membrane StructuresGenotypeHepacivirusHumansMembrane ProteinsRNA, ViralViral Nonstructural ProteinsVirus ReplicationMembrane ProteinsNS4B protein, flavivirusRNA, ViralSURF4 protein, humanViral Nonstructural Proteinsdouble-membrane vesiclesHCVhepatitis C virusmembranous webNS4Bpoliovirusreplicationreplication complexSurfeit 4

Identifiers

PMID31645450
PMCPMC6955281
OpenAlexW2981554019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.