Evidence map›Paper›PMID 31643141›Full record

ArticleFEBS open bio2020

Disorder-to-order transition in PE-PPE proteins of Mycobacterium tuberculosis augments the pro-pathogen immune response.

Javeed Ahmad, Mohd Khubaib, Javaid Ahmad Sheikh, Rita Pancsa, Saroj Kumar, Alagiri Srinivasan, Mohan Madan Babu, Seyed E Hasnain, Nasreen Z Ehtesham

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Expression of a uniqueFrontiers in microbiology · 2024
    Article
  8. Pangenome Reconstruction ofMicroorganisms · 2023
    Article
  9. Frontiers in immunology · 2023
    Article
  10. Review
  11. Review
  12. Article
  13. TheInternational journal of molecular sciences · 2022
    Review
  14. PGRS Domain of Rv0297 ofInternational journal of molecular sciences · 2021
    Article
  15. Frontiers in immunology · 2021
    Article
  16. Frontiers in immunology · 2021
    Article
  17. Comparative Genomics ofFrontiers in veterinary science · 2021
    Article
  18. The unfoldase ClpC1 ofThe Journal of biological chemistry · 2020
    Article
  19. PGRS Domain of Rv0297 ofFrontiers in cellular and infection microbiology · 2020
    Article
  20. ImmunodominantFrontiers in immunology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Javeed AhmadInflammation Biology and Cell Signalling Laboratory, National Institute of Pathology, New Delhi, India.
Mohd KhubaibJH Institute of Molecular Medicine, Jamia Hamdard, New Delhi, India.
Javaid Ahmad SheikhInflammation Biology and Cell Signalling Laboratory, National Institute of Pathology, New Delhi, India.
Rita PancsaMedical Research Council, Laboratory of Molecular Biology, Cambridge, UK.
Saroj KumarDepartment of Biophysics, All India Institute of Medical Sciences, New Delhi, India.
Alagiri SrinivasanDepartment of Biophysics, All India Institute of Medical Sciences, New Delhi, India.
Mohan Madan BabuMedical Research Council, Laboratory of Molecular Biology, Cambridge, UK.
Seyed E HasnainJH Institute of Molecular Medicine, Jamia Hamdard, New Delhi, India.ORCID 0000-0002-2967-0791
Nasreen Z EhteshamInflammation Biology and Cell Signalling Laboratory, National Institute of Pathology, New Delhi, India.
Jamia Hamdard · INAll India Institute of Medical Sciences · INMRC Laboratory of Molecular Biology · GBNational Institute of Pathology · IN

Funding

Medical Research Council MC_U105185859
6 · The paper itself

Abstract

A growing body of evidence supports the hypothesis that intrinsically disordered proteins often mediate host-pathogen interactions and modulate host functions for pathogen survival and virulence. Mycobacterium tuberculosis (M.tb) has evolved largely through reductive evolution, with a few exceptions such as the glycine-alanine-rich PE-PPE/PGRS protein family, which has been expanding in pathogenic mycobacteria. Here, our analyses of the M.tb proteome and secretome revealed that the PE-PGRS subfamily is enriched for disordered regions and disordered binding sites, pointing to their importance in host-pathogen interactions. As a case study, the secondary structure of PE35-PPE68 and PE32-PPE65 of the pathogenesis-related RD1 and RD8 regions was analyzed through Fourier-transform infrared spectroscopy. These disordered proteins displayed a considerable structural shift from disordered to ordered while engaged in the formation of complexes. While these proteins are immunogenic individually and enhance the pro-pathogen response, their corresponding complexes enhanced the responses manifold as displayed here by PE35 and PPE68. It is likely that M.tb exploits such disorder-order structural dynamics as a strategy to mount a pro-pathogen response and subvert host defense for productive infection. This functional gain also serves as a means to compensate genomic content loss due to reductive evolution.

Indexed as

AnimalsBacterial ProteinsCells, CulturedComputational BiologyGlutamic AcidMiceMice, Inbred C57BLMycobacterium tuberculosisProlineProteomeBacterial ProteinsGlutamic AcidProlineProteomefolding-upon-bindingimmune modulationimmunogenicityMycobacterium tuberculosispathogenesisprotein-protein interaction

Identifiers

PMID31643141
PMCPMC6943233
OpenAlexW2982136796

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.