Evidence map›Paper›PMID 31642367›Full record

ArticleJournal of the American Heart Association2019

Epigenome-Wide Association Study for All-Cause Mortality in a Cardiovascular Cohort Identifies Differential Methylation in Castor Zinc Finger 1 (

Jawan W Abdulrahim, Lydia Coulter Kwee, Elizabeth Grass, Ilene C Siegler, Redford Williams, Ravi Karra, William E Kraus, Simon G Gregory, Svati H Shah

Open access · goldAbstract read
In one paragraph

Article in Journal of the American Heart Association, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 3 pooled it
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 3 syntheses or guidelines pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Genetic and epigenetic signatures associated with plasma oxytocin levels in children and adolescents with autism spectrum disorder.Autism research : official journal of the International Society for Autism Research · 2023
    Trial
  5. Emerging opportunities for DNA methylation biomarkers in cattle improvement.The Journal of reproduction and development · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Biomedicines · 2023
    Review
  10. Article
  11. Article
  12. Review
  13. Ten Years of EWAS.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Review
  14. Genetic and epigenetic analyses of panic disorder in the post-GWAS era.Journal of neural transmission (Vienna, Austria : 1996) · 2020
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jawan W AbdulrahimDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Lydia Coulter KweeDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Elizabeth GrassDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Ilene C SieglerDepartment of Psychiatry and Behavioral Sciences Duke University Durham NC.
Redford WilliamsDepartment of Psychiatry and Behavioral Sciences Duke University Durham NC.
Ravi KarraDivision of Cardiology Department of Medicine Duke University School of Medicine Durham NC.
William E KrausDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Simon G GregoryDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Svati H ShahDuke Molecular Physiology Institute Duke University School of Medicine Duke University Durham NC.
Duke University · US

Funding

The Genetics Of Biobehavioral Risk Factors For CVDP01HL036587 · NHLBI · DUKE UNIVERSITY · PI KRAUS, WILLIAM E · 1986 to 2020
$35.9M
Metabolomic Quantitative Trait Locus (mQTL) Genetic Mapping in Human CVDR01HL095987 · NHLBI · DUKE UNIVERSITY · PI SHAH, SVATI H. · 2009 to 2013
$3.4M
NHLBI NIH HHS P01 HL036587NHLBI NIH HHS R01 HL095987
6 · The paper itself

Abstract

Background DNA methylation is implicated in many chronic diseases and may contribute to mortality. Therefore, we conducted an epigenome-wide association study (EWAS) for all-cause mortality with whole-transcriptome data in a cardiovascular cohort (CATHGEN [Catheterization Genetics]). Methods and Results Cases were participants with mortality≥7 days postcatheterization whereas controls were alive with≥2 years of follow-up. The Illumina Human Methylation 450K and EPIC arrays (Illumina, San Diego, CA) were used for the discovery and validation sets, respectively. A linear model approach with empirical Bayes estimators adjusted for confounders was used to assess difference in methylation (Δβ). In the discovery set (55 cases, 49 controls), 25 629 (6.5%) probes were differently methylated (

Indexed as

DNA MethylationGenome-Wide Association StudyAgedCalpainCardiovascular DiseasesCase-Control StudiesChloride-Bicarbonate AntiportersCpG IslandsDNA-Binding ProteinsDNA ProbesEpigenomeFemaleFollow-Up StudiesGene Expression ProfilingHumansMaleCalpainCAPN3 protein, humanCASZ1 protein, humanChloride-Bicarbonate AntiportersDNA-Binding ProteinsDNA ProbesMATK protein, humanMuscle ProteinsNCOR2 protein, humanNuclear Receptor Co-Repressor 2Protein IsoformsProto-Oncogene Proteins pp60(c-src)RNA, MessengerSLC4A9 protein, humanTranscription Factorscardiac biomarkersepigeneticsmortalityoutcometranscriptome

Identifiers

PMID31642367
PMCPMC6898816
OpenAlexW2981724842

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.