Evidence map›Paper›PMID 31641843›Full record

ArticleJournal of mathematical biology2020

Biodiversity, Shapley value and phylogenetic trees: some remarks.

Hubert Stahn

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Article in Journal of mathematical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

1 author.

Hubert StahnAix-Marseille University (Aix-Marseille School of Economics), CNRS, EHESS & ECM, AMSE, Château Lafarge, 50 Chemin du château Lafarge, 13290, Les Milles, France. hubert.stahn@univ-amu.fr.ORCID 0000-0002-9564-5404

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This paper explores the main differences between the Shapley values of a set of taxa introduced by Haake et al. (J Math Biol 56:479-497, 2007. https://doi.org/10.1007/s00285-007-0126-2) and Fuchs and Jin (J Math Biol 71:1133-1147, 2015. https://doi.org/10.1007/s00285-014-0853-0), the latter having been found identical to the Fair Proportion index (Redding and Mooers in Conserv Biol 20:1670-1678, 2006. https://doi.org/10.1111/j.1523-1739.2006.00555.x). In line with Shapley (in: Kuhn, Tucker (eds) Contributions to to the theory of games, volume II, annals of mathematics studies 28, Princeton University Press, Princeton, 1953), we identify the cooperative game basis for each of these two classes of phylogenetic games and use them (i) to construct simple formulas for these two Shapley values and (ii) to compare these different approaches. Using the set of weights of a phylogenetic tree as a parameter space, we then discuss the conditions under which these two values coincide and, if they are not the same, revisit Hartmann's (J Math Biol 67:1163-1170, 2013. https://doi.org/10.1007/s00285-012-0585-y) convergence result. An example illustrates our main argument. Finally, we compare the species ranking induced by these two values. Considering the Kendall and the Spearman rank correlation coefficient, simulations show that these rankings are strongly correlated. These results are consistent with Wicke and Fischer (J Theor Biol 430:207-214, 2017. https://doi.org/10.1016/j.jtbi.2017.07.010), who reach similar conclusions with a different simulation method.

Indexed as

BiodiversityGame TheoryPhylogenyComputer SimulationBiodiversityFair Proportion indexPhylogenetic treesShapley value

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