Evidence map›Paper›PMID 31641782›Full record

ReviewImmunogenetics2020

The IPD Project: a centralised resource for the study of polymorphism in genes of the immune system.

Giuseppe Maccari, James Robinson, John A Hammond, Steven G E Marsh

Abstract readReview
In one paragraph

Review in Immunogenetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Identification of a DRB3*011:01-restricted CD4Frontiers in immunology · 2023
    Article
  14. Article
  15. Enhanced Extracellular Transfer of HLA-DQ Activates CD3International journal of molecular sciences · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Giuseppe MaccariThe Pirbright Institute, Pirbright, Woking, Surrey, UK.
James RobinsonAnthony Nolan Research Institute, Royal Free Hospital, London, UK.
John A HammondThe Pirbright Institute, Pirbright, Woking, Surrey, UK.
Steven G E MarshAnthony Nolan Research Institute, Royal Free Hospital, London, UK. steven.marsh@ucl.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/M011488/1Biotechnology and Biological Sciences Research Council BBS/E/I/00001710Biotechnology and Biological Sciences Research Council BBS/E/I/00007030Biotechnology and Biological Sciences Research Council BBS/E/I/00007038
6 · The paper itself

Abstract

The Immuno Polymorphism Database (IPD), https://www.ebi.ac.uk/ipd/, is a set of specialist databases that enable the study of polymorphic genes which function as part of the vertebrate immune system. The major focus is on the hyperpolymorphic major histocompatibility complex (MHC) genes and the killer-cell immunoglobulin-like receptor (KIR) genes, by providing the official repository and primary source of sequence data. Databases are centred around humans as well as animals important for food security, for companionship and as disease models. The IPD project works with specialist groups or nomenclature committees who provide and manually curate individual sections before they are submitted for online publication. To reflect the recent advance of allele sequencing technologies and the increasing demands of novel tools for the analysis of genomic variation, the IPD project is undergoing a progressive redesign and reorganisation. In this review, recent updates and future developments are discussed, with a focus on the core concepts to better future-proof the project.

Indexed as

Antigens, Human PlateletComputational BiologyDatabases as TopicDatabases, FactualDatabases, GeneticEpitopes, T-LymphocyteHLA AntigensHumansImmunityMajor Histocompatibility ComplexPolymorphism, GeneticSequence AlignmentAntigens, Human PlateletEpitopes, T-LymphocyteHLA AntigensDatabaseHLAIPDMHCNomenclature

Identifiers

PMID31641782
PMCPMC6970959

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.