Evidence map›Paper›PMID 31641125›Full record

ArticleNature communications2019

The global diversity of Haemonchus contortus is shaped by human intervention and climate.

G Sallé, S R Doyle, J Cortet, J Cabaret, M Berriman, N Holroyd, J A Cotton

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
16.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 111 citations in OpenAlex.

  1. Pooled it
  2. Article
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  5. Article
  6. Investigating the Epidemiology ofCase reports in veterinary medicine · 2026
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  14. The Mitogenome of the Haecon-5 Strain ofInternational journal of molecular sciences · 2024
    Article
  15. Saudi journal of biological sciences · 2024
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

G SalléWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK. Guillaume.Salle@inra.fr.ORCID http://orcid.org/0000-0002-4032-139X
S R DoyleWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0001-9167-7532
J CortetINRA - U. Tours, UMR 1282 ISP Infectiologie et Santé Publique, Centre de recherche Val de Loire, Nouzilly, France.
J CabaretINRA - U. Tours, UMR 1282 ISP Infectiologie et Santé Publique, Centre de recherche Val de Loire, Nouzilly, France.
M BerrimanWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.ORCID http://orcid.org/0000-0002-9581-0377
N HolroydWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
J A CottonWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
Wellcome Sanger Institute · GBUniversité de Tours · FR

Funding

Biotechnology and Biological Sciences Research Council BB/M003949/1Wellcome Trust
6 · The paper itself

Abstract

Haemonchus contortus is a haematophagous parasitic nematode of veterinary interest. We have performed a survey of its genome-wide diversity using single-worm whole genome sequencing of 223 individuals sampled from 19 isolates spanning five continents. We find an African origin for the species, together with evidence for parasites spreading during the transatlantic slave trade and colonisation of Australia. Strong selective sweeps surrounding the β-tubulin locus, a target of benzimidazole anthelmintic drug, are identified in independent populations. These sweeps are further supported by signals of diversifying selection enriched in genes involved in response to drugs and other anthelmintic-associated biological functions. We also identify some candidate genes that may play a role in ivermectin resistance. Finally, genetic signatures of climate-driven adaptation are described, revealing a gene acting as an epigenetic regulator and components of the dauer pathway. These results begin to define genetic adaptation to climate in a parasitic nematode.

Indexed as

Genetic VariationAnimalsAnthelminticsClimateDrug ResistanceGenome, HelminthHaemonchiasisHaemonchusHumansPhylogenyAnthelmintics

Identifiers

PMID31641125
PMCPMC6805936
OpenAlexW2981590877

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.