Evidence map›Paper›PMID 31640564›Full record

ArticleBMC genomics2019

Rapid adaptation of signaling networks in the fungal pathogen Magnaporthe oryzae.

Stefan Bohnert, Luis Antelo, Christiane Grünewald, Alexander Yemelin, Karsten Andresen, Stefan Jacob

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stefan BohnertInstitut für Biotechnologie und Wirkstoff-Forschung gGmbH (IBWF), Erwin-Schrödinger-Str. 56, D-67663, Kaiserslautern, Germany.
Luis AnteloInstitut für Biotechnologie und Wirkstoff-Forschung gGmbH (IBWF), Erwin-Schrödinger-Str. 56, D-67663, Kaiserslautern, Germany.
Christiane GrünewaldJohannes Gutenberg-University Mainz, Mikrobiologie und Weinforschung am Institut für Molekulare Physiologie, Johann-Joachim-Becherweg 15, D-55128, Mainz, Germany.
Alexander YemelinInstitut für Biotechnologie und Wirkstoff-Forschung gGmbH (IBWF), Erwin-Schrödinger-Str. 56, D-67663, Kaiserslautern, Germany.
Karsten AndresenJohannes Gutenberg-University Mainz, Mikrobiologie und Weinforschung am Institut für Molekulare Physiologie, Johann-Joachim-Becherweg 15, D-55128, Mainz, Germany.
Stefan JacobInstitut für Biotechnologie und Wirkstoff-Forschung gGmbH (IBWF), Erwin-Schrödinger-Str. 56, D-67663, Kaiserslautern, Germany. jacob@ibwf.de.ORCID http://orcid.org/0000-0003-2966-4110
Institut für Biotechnologie und Wirkstoff-Forschung · DEJohannes Gutenberg University Mainz · DE

Funding

Deutsche Forschungsgemeinschaft 403841309
6 · The paper itself

Abstract

backgroundOne fundamental question in biology is how the evolution of eukaryotic signaling networks has taken place. "Loss of function" (lof) mutants from components of the high osmolarity glycerol (HOG) signaling pathway in the filamentous fungus Magnaporthe oryzae are viable, but impaired in osmoregulation.

resultsAfter long-term cultivation upon high osmolarity, stable individuals with reestablished osmoregulation capacity arise independently from each of the mutants with inactivated HOG pathway. This phenomenon is extremely reproducible and occurs only in osmosensitive mutants related to the HOG pathway - not in other osmosensitive Magnaporthe mutants. The major compatible solute produced by these adapted strains to cope with high osmolarity is glycerol, whereas it is arabitol in the wildtype strain. Genome and transcriptome analysis resulted in candidate genes related to glycerol metabolism, perhaps responsible for an epigenetic induced reestablishment of osmoregulation, since these genes do not show structural variations within the coding or promotor sequences.

conclusionThis is the first report of a stable adaptation in eukaryotes by producing different metabolites and opens a door for the scientific community since the HOG pathway is worked on intensively in many eukaryotic model organisms.

Indexed as

Gene Regulatory NetworksAdaptation, PhysiologicalDioxolesDrug Resistance, FungalFungal ProteinsGene Expression ProfilingGene Expression Regulation, FungalGenome, FungalGlycerolLoss of Function MutationMagnaportheOryzaOsmoregulationPlant DiseasesPyrrolesSalt StressDioxolesfludioxonilFungal ProteinsGlycerolPyrrolesEpigeneticsEvolution of signaling networksHOG pathwayMagnaporthe oryzaeRapid adaptationReestablishment of osmoregulationRewiringSuppressor

Identifiers

PMID31640564
PMCPMC6805500
OpenAlexW2981908001

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.