Evidence map›Paper›PMID 31636388›Full record

ArticleOncogene2020

Hypermethylation of FOXA1 and allelic loss of PTEN drive squamous differentiation and promote heterogeneity in bladder cancer.

Vasty Osei-Amponsa, Jenna M Buckwalter, Lauren Shuman, Zongyu Zheng, Hironobu Yamashita, Vonn Walter, Thomas Wildermuth, Justine Ellis-Mohl, Chang Liu, Joshua I Warrick and 8 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

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  18. Novel Tyrosine Kinase Targets in Urothelial Carcinoma.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Vasty Osei-Amponsa *Department of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Jenna M Buckwalter *Department of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Lauren ShumanDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.ORCID http://orcid.org/0000-0003-2383-2240
Zongyu ZhengDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Hironobu YamashitaDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Vonn WalterDepartment of Public Health Sciences, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.ORCID http://orcid.org/0000-0001-6114-6714
Thomas WildermuthDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Justine Ellis-MohlDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Chang LiuDepartment of Urology, Columbia University, New York, NY, USA.
Joshua I WarrickDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Lisa M ShantzDepartment of Cellular and Molecular Physiology, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Robert P FeehanDepartment of Cellular and Molecular Physiology, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Hikmat Al-AhmadieDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Cathy MendelsohnDepartment of Urology, Columbia University, New York, NY, USA.
Jay D RamanDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA.
Klaus H KaestnerDepartment of Genetics, University of Pennsylvania, Philadelphia, PA, USA.
Xue-Ru WuDepartments of Urology and Pathology, New York University School of Medicine, New York, NY, USA.
David J DeGraffDepartment of Pathology and Laboratory Medicine, The Pennsylvania State University, College of Medicine, Hershey, PA, USA. ddegraff@pennstatehealth.psu.edu.
Pennsylvania State University · USColumbia University · USMemorial Sloan Kettering Cancer Center · USUniversity of Pennsylvania · USVA NY Harbor Healthcare System · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Mechanisms of Urothelial Metaplasia and TumorigenesisR00CA172122 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI DEGRAFF, DAVID J. · 2014 to 2016
$727k
Mechanisms of Urothelial Metaplasia and TumorigenesisK99CA172122 · NCI · VANDERBILT UNIVERSITY · PI DEGRAFF, DAVID J. · 2013 to 2013
$94k
NCI NIH HHS K99 CA172122NCI NIH HHS P30 CA008748NCI NIH HHS R00 CA172122
6 · The paper itself

Abstract

Intratumoral heterogeneity in bladder cancer is a barrier to accurate molecular sub-classification and treatment efficacy. However, individual cellular and mechanistic contributions to tumor heterogeneity are controversial. We examined potential mechanisms of FOXA1 and PTEN inactivation in bladder cancer and their contribution to tumor heterogeneity. These analyses were complemented with inactivation of FOXA1 and PTEN in intermediate and luminal mouse urothelium. We show inactivation and reduced expression of FOXA1 and PTEN is prevalent in human disease, where PTEN and FOXA1 are downregulated by allelic loss and site-specific DNA hypermethylation, respectively. Conditional inactivation of both Foxa1 and Pten in intermediate/luminal cells in mice results in development of bladder cancer exhibiting squamous features as well as enhanced sensitivity to a bladder-specific carcinogen. In addition, FOXA1 is hypermethylated in basal bladder cancer cell lines, and this is reversed by treatment with DNA methyltransferase inhibitors. By integrating human correlative and in vivo studies, we define a critical role for PTEN loss and epigenetic silencing of FOXA1 in heterogeneous human disease and show genetic targeting of luminal/intermediate cells in mice drives squamous differentiation.

Indexed as

Cell DifferentiationDNA MethylationLoss of HeterozygosityAnimalsApoptosisBiomarkers, TumorCarcinoma, Squamous CellCell ProliferationFemaleGene Expression Regulation, NeoplasticHepatocyte Nuclear Factor 3-alphaHumansMaleMiceMice, Inbred C57BLMice, KnockoutBiomarkers, TumorFOXA1 protein, humanHepatocyte Nuclear Factor 3-alphaPTEN PhosphohydrolasePTEN protein, human

Identifiers

PMID31636388
OpenAlexW2980462848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.