Evidence map›Paper›PMID 31636386›Full record

ArticleOncogene2020

TFAP2C regulates carbonic anhydrase XII in human breast cancer.

Christopher M Franke, Vivian W Gu, Benjamin G Grimm, Victoria C Cassady, Jeffrey R White, Ronald J Weigel, Mikhail V Kulak

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Christopher M FrankeDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Vivian W GuDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Benjamin G GrimmDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Victoria C CassadyDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Jeffrey R WhiteDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Ronald J WeigelDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA.
Mikhail V KulakDepartments of Surgery, University of Iowa, Iowa City, IA, 52242, USA. mikhail-kulak@uiowa.edu.ORCID http://orcid.org/0000-0002-4307-5868
University of Iowa · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
6 · The paper itself

Abstract

The expression of carbonic anhydrase XII (CA12) is associated with the expression of estrogen receptor alpha (ERα) in breast cancer and is linked to a good prognosis with a lower risk of metastasis. Transcription Factor Activator Protein 2γ (TFAP2C, AP-2γ) governs luminal breast cancer phenotype through direct and indirect regulation of ERα and ERα-associated genes, GATA3, FOXA1, EGFR, CDH1, DSP, KRT7, FBP1, MYB, RET, KRT8, MUC1, and ERBB2-genes which are responsible for the luminal signature in breast cancer. Herein, utilizing chromatin immunoprecipitation and direct sequencing (ChIP-seq), we show that CA12 is regulated by AP-2γ through binding with its promoter region in luminal breast cancer cell lines and indirectly through a distal estrogen-responsive region in ERα-positive cell lines by upregulation of ERα. CA12 is transcriptionally silenced in basal breast cancer cell lines through histone deacetylation and CpG methylation of the promoter region and can be re-activated with Trichostatin A (histone deacetylase inhibitor) and/or 5-aza-dC (an inhibitor of DNA methylation). Strong concordance in co-expression of CA12 and ESR1 (R

Indexed as

Gene Expression Regulation, NeoplasticAntigens, NeoplasmApoptosisBiomarkers, TumorBreast NeoplasmsCarbonic Anhydrase IXCell ProliferationDNA MethylationEstrogen Receptor alphaFemaleHumansPrognosisTranscription Factor AP-2Tumor Cells, CulturedAntigens, NeoplasmBiomarkers, TumorCA9 protein, humanCarbonic Anhydrase IXESR1 protein, humanEstrogen Receptor alphaTFAP2C protein, humanTranscription Factor AP-2

Identifiers

PMID31636386
OpenAlexW2980627728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.