Evidence map›Paper›PMID 31635241›Full record

ArticleNutrients2019

Improving the Health Benefits of Snap Bean: Genome-Wide Association Studies of Total Phenolic Content.

James R Myers, Lyle T Wallace, Samira Mafi Moghaddam, Adrienne E Kleintop, Dimas Echeverria, Henry J Thompson, Mark A Brick, Rian Lee, Phillip E McClean

Open access · goldAbstract read
In one paragraph

Article in Nutrients, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. IntegratingHeliyon · 2024
    Article
  3. Article
  4. Genetic control of pod morphological traits and pod edibility in a common bean RIL population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  5. Article
  6. A robust SNP-haplotype assay forFrontiers in plant science · 2023
    Article
  7. Prospects of snap beans (Frontiers in nutrition · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Dissecting the genetic control of seed coat color in a RIL population of common bean (Phaseolus vulgaris L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 1 country.

James R MyersDepartment of Horticulture, Oregon State University, Corvallis, OR 97331, USA. james.myers@oregonstate.edu.ORCID 0000-0003-0976-144X
Lyle T WallaceDepartment of Horticulture, University of Wisconsin at Madison, Madison, WI 53706, USA. lyle.wallace@usda.gov.ORCID 0000-0002-6985-5854
Samira Mafi MoghaddamPlant Resilience Institute, Department of Plant Biology, Michigan State University, East Lansing, MI 48824, USA. smafi@msu.edu.
Adrienne E KleintopDepartment of Plant Science, Delaware Valley University, Doylestown, PA 18901, USA. Adrienne.Kleintop@delval.edu.
Dimas EcheverriaRNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA. dimas.echeverria@umassmed.edu.
Henry J ThompsonDepartment of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA. Henry.Thompson@colostate.edu.ORCID 0000-0002-3730-9322
Mark A BrickDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, USA. Mark.Brick@colostate.edu.
Rian LeeDepartment of Plant Science, North Dakota State University, Fargo, ND 58105, USA. rian.lee@ndsu.edu.
Phillip E McCleanDepartment of Plant Science, North Dakota State University, Fargo, ND 58105, USA. phillip.mcclean@ndsu.edu.
Colorado State University · USNorth Dakota State University · USDelaware Valley College · USMichigan State University · USOregon State University · USUniversity of Massachusetts Chan Medical School · USUniversity of Wisconsin–Madison · US

Funding

U.S. Department of Agriculture USDA-NIFA-2009-85606-05964
6 · The paper itself

Abstract

Snap beans are a significant source of micronutrients in the human diet. Among the micronutrients present in snap beans are phenolic compounds with known beneficial effects on human health, potentially via their metabolism by the gut-associated microbiome. The genetic pathways leading to the production of phenolics in snap bean pods remain uncertain. In this study, we quantified the level of total phenolic content (TPC) in the Bean Coordinated Agriculture Program (CAP) snap bean diversity panel of 149 accessions. The panel was characterized spectrophotometrically for phenolic content with a Folin-Ciocalteu colorimetric assay. Flower, seed and pod color were also quantified, as red, purple, yellow and brown colors are associated with anthocyanins and flavonols in common bean. Genotyping was performed through an Illumina Infinium Genechip BARCBEAN6K_3 single nucleotide polymorphism (SNP) array. Genome-Wide Association Studies (GWAS) analysis identified 11 quantitative trait nucleotides (QTN) associated with TPC. An SNP was identified for TPC on Pv07 located near the

Indexed as

Genome-Wide Association StudyGene Expression Regulation, PlantGenetic MarkersGenetic VariationGenotypeHumansPhaseolusPhenolsPlant ProteinsSeedsGenetic MarkersPhenolsPlant Proteinsassociation mappingcommon beanflavonoidsgenome wide association mappingPhaseolus vulgaristotal phenolic compounds

Identifiers

PMID31635241
PMCPMC6835575
OpenAlexW2981107923

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.