Evidence map›Paper›PMID 31632417›Full record

ArticleFrontiers in plant science2019

Genome-Wide Identification of Splicing Quantitative Trait Loci (sQTLs) in Diverse Ecotypes of

Waqas Khokhar, Musa A Hassan, Anireddy S N Reddy, Saurabh Chaudhary, Ibtissam Jabre, Lee J Byrne, Naeem H Syed

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  5. A gene expression atlas ofFrontiers in plant science · 2025
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  13. Identifying QTLs for Grain Size in a Colossal Grain Rice (International journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Waqas KhokharSchool of Human and Life Sciences, Canterbury Christ Church University, Canterbury, United Kingdom.
Musa A HassanDivision of Infection and Immunity, The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.
Anireddy S N ReddyDepartment of Biology and Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, United States.
Saurabh ChaudharySchool of Human and Life Sciences, Canterbury Christ Church University, Canterbury, United Kingdom.
Ibtissam JabreSchool of Human and Life Sciences, Canterbury Christ Church University, Canterbury, United Kingdom.
Lee J ByrneSchool of Human and Life Sciences, Canterbury Christ Church University, Canterbury, United Kingdom.
Naeem H SyedSchool of Human and Life Sciences, Canterbury Christ Church University, Canterbury, United Kingdom.
Canterbury Christ Church University · GBColorado State University · USRoslin Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing (AS) of pre-mRNAs contributes to transcriptome diversity and enables plants to generate different protein isoforms from a single gene and/or fine-tune gene expression during different development stages and environmental changes. Although AS is pervasive, the genetic basis for differential isoform usage in plants is still emerging. In this study, we performed genome-wide analysis in 666 geographically distributed diverse ecotypes of

Indexed as

adaptationalternative splicingArabidopsis thalianaGWASisoform usagesplicing quantitative trait loci (sQTL)

Identifiers

PMID31632417
PMCPMC6785726
OpenAlexW2970551924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.